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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00164
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00164
Identity
- Kingdom:
- phage
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-84
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.59 | 49.0 | 4.18e-01 | 93.9% | 79.6% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 39.0 | 3.37e-01 | 75.6% | 81.6% |
| 2f9aA01 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.54 | 40.0 | 2.61e-01 | 79.3% | 72.5% |
| 5b08A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 33.0 | 3.13e-01 | 80.5% | 52.0% |
| 2vzwB00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 39.0 | 3.30e-01 | 81.7% | 99.3% |
| 2ogkD00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.52 | 42.0 | 3.62e-01 | 92.7% | 79.6% |
| 4bqqB02 | 3.90.1750.20 | Alpha Beta › Alpha-Beta Complex › Hect, E3 ligase catalytic domain fold › Putative Large Serine Recombinase; Chain B, Domain 2 | 0.51 | 43.0 | 3.39e-01 | 97.6% | 58.4% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.50 | 37.0 | 3.03e-01 | 80.5% | 95.2% |
| 1zhhB01 | 3.30.450.220 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › LuxQ periplasmic domain, N-terminal subdomain | 0.50 | 37.0 | 3.04e-01 | 79.3% | 65.6% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3734775 | 192.29.1.174 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › PF28510 | 0.59 | 45.0 | 3.28e-01 | 80.5% | 32.7% |
| 3753305 | 3016.1.1.22 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › PDXDC1-like_cen2 | 0.59 | 37.0 | 3.40e-01 | 86.6% | 47.3% |
| 5047069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 41.0 | 3.05e-01 | 80.5% | 92.6% |
| 5079265 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.55 | 39.0 | 2.94e-01 | 76.8% | 55.1% |
| 4983137 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.54 | 44.0 | 3.87e-01 | 92.7% | 83.7% |
| 5023895 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.54 | 44.0 | 3.78e-01 | 93.9% | 86.2% |
| 3238136 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 46.0 | 3.12e-01 | 97.6% | 43.6% |
| 4974604 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.54 | 43.0 | 3.83e-01 | 90.2% | 59.2% |
| 3235191 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.54 | 46.0 | 3.10e-01 | 98.8% | 41.2% |
| 4952592 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.54 | 43.0 | 3.73e-01 | 91.5% | 81.4% |
| 4140531 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.53 | 42.0 | 2.63e-01 | 86.6% | 69.1% |
| 3234667 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.53 | 45.0 | 3.08e-01 | 100.0% | 54.3% |
| 3227174 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 31.0 | 3.02e-01 | 85.4% | 52.2% |
| 3236416 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.52 | 44.0 | 2.97e-01 | 97.6% | 41.1% |
| 3408766 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.52 | 44.0 | 2.99e-01 | 97.6% | 47.0% |
| 4021113 | 601.1.1.90 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF3433 | 0.52 | 39.0 | 3.07e-01 | 80.5% | 37.7% |
| 5012702 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.52 | 42.0 | 3.83e-01 | 92.7% | 96.5% |
| 4995124 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.51 | 42.0 | 3.62e-01 | 93.9% | 77.1% |
| 4021523 | 2007.2.3.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Syja_N | 0.51 | 44.0 | 2.99e-01 | 100.0% | 94.7% |
| 2408726 | 314.1.1.1 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2 | 0.51 | 44.0 | 3.06e-01 | 97.6% | 81.8% |
| 3494833 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 43.0 | 2.74e-01 | 96.3% | 48.9% |
| 5070035 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.50 | 42.0 | 3.53e-01 | 93.9% | 80.0% |
| 4986703 | 882.1.1.4 ↗ | a+b two layers › Ribosomal protein L5 › Ribosomal protein L5 › Ribosomal protein L5 › RNA_binding | 0.50 | 40.0 | 3.45e-01 | 91.5% | 81.4% |