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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00207
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00207
Identity
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-75
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gyoB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.81 | 64.0 | 5.16e-01 | 98.6% | 45.3% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.79 | 53.0 | 5.82e-01 | 87.8% | 86.4% |
| 2fztA00 | 6.10.250.50 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.79 | 61.0 | 6.11e-01 | 83.8% | 83.1% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 59.0 | 6.29e-01 | 91.9% | 93.7% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.78 | 52.0 | 5.95e-01 | 91.9% | 96.2% |
| 2ho1B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.75 | 49.0 | 3.45e-01 | 71.6% | 22.2% |
| 2katA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.74 | 58.0 | 5.06e-01 | 86.5% | 57.4% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.74 | 57.0 | 4.99e-01 | 83.8% | 55.9% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 58.0 | 5.80e-01 | 89.2% | 98.7% |
| 3pubA01 | 1.10.10.2400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain | 0.70 | 51.0 | 5.18e-01 | 77.0% | 78.4% |
| 4g1tA02 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 49.0 | 5.30e-01 | 85.1% | 95.1% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 60.0 | 5.39e-01 | 100.0% | 95.1% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.67 | 48.0 | 5.15e-01 | 77.0% | 100.0% |
| 2vkjA00 | 1.20.58.2030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 55.0 | 4.90e-01 | 90.5% | 80.2% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.66 | 47.0 | 5.11e-01 | 89.2% | 98.2% |
| 8h72B01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.65 | 49.0 | 3.26e-01 | 82.4% | 40.2% |
| 4m7cB00 | 1.25.40.210 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Telomere repeat-binding factor, dimerisation domain | 0.65 | 57.0 | 4.20e-01 | 100.0% | 59.1% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 57.0 | 5.19e-01 | 100.0% | 98.0% |
| 2kckA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.63 | 56.0 | 4.88e-01 | 98.6% | 81.2% |
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.62 | 45.0 | 4.00e-01 | 91.9% | 50.9% |
| 2c2lA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.62 | 53.0 | 4.50e-01 | 100.0% | 69.9% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 48.0 | 4.21e-01 | 90.5% | 71.4% |
| 1xnfA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.61 | 50.0 | 3.50e-01 | 93.2% | 90.7% |
| 1owaA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 52.0 | 4.74e-01 | 100.0% | 98.1% |
| 2jbwA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.61 | 51.0 | 4.65e-01 | 97.3% | 98.1% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.60 | 50.0 | 4.25e-01 | 91.9% | 82.6% |
| 4akgA14 | 1.20.1280.160 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.59 | 45.0 | 3.97e-01 | 81.1% | 99.1% |
| 4ikhA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 51.0 | 4.32e-01 | 98.6% | 70.9% |
| 1bpoA02 | 1.25.40.30 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 53.0 | 4.13e-01 | 98.6% | 47.7% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.59 | 47.0 | 4.03e-01 | 87.8% | 62.2% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 49.0 | 4.23e-01 | 93.2% | 70.9% |
| 3sz7A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 48.0 | 3.83e-01 | 93.2% | 58.3% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.57 | 42.0 | 3.42e-01 | 81.1% | 85.2% |
| 2qeuB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.56 | 46.0 | 3.87e-01 | 93.2% | 54.9% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.56 | 40.0 | 3.96e-01 | 98.6% | 70.9% |
| 4xt1A00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 47.0 | 3.17e-01 | 100.0% | 38.8% |
| 2ksnA01 | 1.20.225.20 | Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Ub domain-containing protein, DC-UbP/UBTD2, N-terminal domain | 0.53 | 39.0 | 3.83e-01 | 85.1% | 74.4% |
| 1i36A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 40.0 | 3.72e-01 | 87.8% | 91.9% |
| 4huqS00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.52 | 40.0 | 3.14e-01 | 85.1% | 47.6% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3991215 | 109.4.1.649 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4807 | 0.82 | 64.0 | 4.82e-01 | 83.8% | 37.6% |
| 4874432 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.81 | 70.0 | 5.72e-01 | 93.2% | 92.2% |
| 3998776 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.80 | 70.0 | 6.80e-01 | 94.6% | 90.0% |
| 3333642 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.80 | 62.0 | 4.49e-01 | 82.4% | 34.7% |
| 3407107 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.78 | 67.0 | 5.94e-01 | 100.0% | 65.7% |
| 4944410 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.78 | 62.0 | 3.95e-01 | 86.5% | 83.1% |
| 3484193 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.77 | 67.0 | 3.84e-01 | 100.0% | 10.3% |
| 5055770 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.77 | 59.0 | 5.06e-01 | 100.0% | 51.7% |
| 4881788 | 271.1.1.0 ↗ | beta barrels › GFP-like › GFP-like › GFP-like | 0.76 | 65.0 | 4.54e-01 | 93.2% | 86.9% |
| 3639718 | 109.4.1.862 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ZW10_C2 | 0.76 | 68.0 | 3.95e-01 | 100.0% | 12.0% |
| 3787703 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 65.0 | 4.54e-01 | 94.6% | 36.5% |
| 3374471 | 109.4.1.1269 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif | 0.75 | 56.0 | 4.78e-01 | 81.1% | 50.4% |
| 4019540 | 109.4.1.862 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ZW10_C2 | 0.75 | 67.0 | 3.85e-01 | 100.0% | 11.6% |
| 4049706 | 109.4.1.275 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rgg_C | 0.74 | 65.0 | 4.55e-01 | 94.6% | 45.0% |
| 4629402 | 109.4.1.206 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO | 0.74 | 62.0 | 4.79e-01 | 93.2% | 43.0% |
| 3741609 | 109.58.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › DNA repair protein Rev1 C-terminal domain › DNA repair protein Rev1 C-terminal domain › REV1_C | 0.73 | 61.0 | 5.64e-01 | 91.9% | 88.4% |
| 3456188 | 109.7.1.10 ↗ | alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › WAV3_C | 0.73 | 57.0 | 5.77e-01 | 100.0% | 86.7% |
| 3650958 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.73 | 60.0 | 4.00e-01 | 87.8% | 25.4% |
| 3671366 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.72 | 60.0 | 3.45e-01 | 89.2% | 14.2% |
| 3937580 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.72 | 64.0 | 3.82e-01 | 100.0% | 28.1% |
| 3477991 | 109.4.1.285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PSMD12-CSN4_N | 0.72 | 61.0 | 4.05e-01 | 93.2% | 58.3% |
| 3402741 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.72 | 61.0 | 4.98e-01 | 93.2% | 87.4% |
| 4544629 | 109.4.1.1919 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_16, YfiO | 0.71 | 57.0 | 4.37e-01 | 87.8% | 39.4% |
| 3839870 | 109.4.1.206 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO | 0.71 | 58.0 | 4.14e-01 | 90.5% | 44.5% |
| 3401657 | 3777.1.1.1 ↗ | alpha bundles › Prolyl 4-hydroxylase alpha subunit dimerization domain › Prolyl 4-hydroxylase alpha subunit dimerization domain › Prolyl 4-hydroxylase alpha subunit dimerization domain › P4Ha_N | 0.71 | 59.0 | 4.11e-01 | 94.6% | 47.5% |
| 3613671 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.69 | 57.0 | 3.90e-01 | 93.2% | 69.6% |
| 4420955 | 109.4.1.206 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › YfiO | 0.68 | 57.0 | 4.00e-01 | 93.2% | 42.9% |
| 5050536 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.68 | 50.0 | 5.17e-01 | 91.9% | 84.3% |
| 5067419 | 109.4.1.95 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 | 0.64 | 48.0 | 3.96e-01 | 85.1% | 43.6% |
| 3804773 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 54.0 | 4.29e-01 | 97.3% | 60.7% |
| 3928070 | 109.4.1.3206 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TT21 | 0.62 | 55.0 | 3.91e-01 | 98.6% | 59.5% |
| 3463470 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.60 | 54.0 | 4.19e-01 | 100.0% | 75.3% |
| 4958531 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.58 | 47.0 | 3.41e-01 | 93.2% | 48.1% |