←Back to structures
Filtrate_w_scaffold_1_prodigal-single.1__X__X__00235
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00235
Identity
- Kingdom:
- phage
Quality
54.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-60
Domain cluster:
representative
CATH (77)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ywxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.78 | 52.0 | 4.17e-01 | 70.2% | 77.2% |
| 2xlpB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.78 | 59.0 | 3.50e-01 | 83.0% | 34.5% |
| 3al9A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.77 | 60.0 | 3.41e-01 | 85.1% | 17.3% |
| 3tw6D02 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.73 | 56.0 | 4.76e-01 | 83.0% | 56.6% |
| 3i3lA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.73 | 56.0 | 3.19e-01 | 83.0% | 29.2% |
| 4hntA04 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.73 | 55.0 | 4.29e-01 | 83.0% | 42.6% |
| 5cxoB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 56.0 | 4.06e-01 | 87.2% | 75.4% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 56.0 | 3.96e-01 | 85.1% | 34.3% |
| 3bg3A01 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.71 | 54.0 | 4.23e-01 | 83.0% | 48.5% |
| 2ivdB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 54.0 | 3.69e-01 | 83.0% | 33.5% |
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.71 | 47.0 | 4.39e-01 | 70.2% | 55.7% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.70 | 61.0 | 4.35e-01 | 100.0% | 65.7% |
| 3be3A00 | 2.30.30.320 | Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain | 0.69 | 59.0 | 5.13e-01 | 100.0% | 81.6% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.69 | 55.0 | 3.39e-01 | 87.2% | 40.9% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.69 | 60.0 | 4.91e-01 | 100.0% | 75.6% |
| 2fgeA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.67 | 57.0 | 3.62e-01 | 97.9% | 93.2% |
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.67 | 54.0 | 4.85e-01 | 93.6% | 85.5% |
| 3kstA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.67 | 55.0 | 3.38e-01 | 93.6% | 26.5% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.66 | 48.0 | 3.07e-01 | 80.9% | 93.3% |
| 2p25A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.66 | 54.0 | 4.06e-01 | 93.6% | 79.8% |
| 1gm5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 52.0 | 4.20e-01 | 93.6% | 88.2% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 56.0 | 4.96e-01 | 100.0% | 79.2% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.66 | 53.0 | 4.06e-01 | 91.5% | 93.7% |
| 1uhzA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 53.0 | 4.42e-01 | 95.7% | 74.2% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 52.0 | 4.27e-01 | 93.6% | 55.7% |
| 3b77A01 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.65 | 48.0 | 3.87e-01 | 83.0% | 60.0% |
| 3ossC00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 57.0 | 5.13e-01 | 100.0% | 90.8% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 51.0 | 4.59e-01 | 93.6% | 83.1% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 51.0 | 4.59e-01 | 89.4% | 77.6% |
| 3g7nB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.64 | 54.0 | 3.44e-01 | 100.0% | 87.9% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 52.0 | 5.28e-01 | 89.4% | 100.0% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 55.0 | 5.01e-01 | 100.0% | 75.4% |
| 1ebdA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 56.0 | 4.16e-01 | 100.0% | 56.2% |
| 2c9oB02 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.63 | 53.0 | 3.99e-01 | 93.6% | 54.0% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 50.0 | 4.24e-01 | 95.7% | 59.3% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 51.0 | 4.44e-01 | 95.7% | 74.4% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 53.0 | 4.86e-01 | 100.0% | 78.5% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 54.0 | 4.70e-01 | 100.0% | 76.0% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 48.0 | 4.00e-01 | 91.5% | 59.6% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 49.0 | 4.40e-01 | 89.4% | 83.8% |
| 5bukB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 53.0 | 3.09e-01 | 100.0% | 64.1% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 52.0 | 4.56e-01 | 100.0% | 73.3% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.61 | 55.0 | 4.34e-01 | 100.0% | 75.5% |
| 2l2nA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 48.0 | 4.35e-01 | 95.7% | 85.9% |
| 2af5A01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.61 | 47.0 | 4.54e-01 | 93.6% | 77.8% |
| 3cz8A02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.61 | 42.0 | 4.00e-01 | 83.0% | 61.4% |
| 3lhoA01 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.60 | 48.0 | 3.13e-01 | 93.6% | 30.5% |
| 3lvtA05 | 2.60.40.2220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 45.0 | 3.93e-01 | 85.1% | 97.4% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.60 | 47.0 | 4.19e-01 | 93.6% | 91.9% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.60 | 49.0 | 3.93e-01 | 100.0% | 58.1% |
| 1mo9A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 52.0 | 3.80e-01 | 100.0% | 48.9% |
| 2qh0A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 48.0 | 3.59e-01 | 93.6% | 42.6% |
| 4oelB00 | 2.40.50.170 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C | 0.59 | 47.0 | 4.31e-01 | 95.7% | 73.9% |
| 3o58B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 42.0 | 3.68e-01 | 78.7% | 48.0% |
| 1zc0A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.59 | 46.0 | 2.91e-01 | 91.5% | 37.8% |
| 3j7yD01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 48.0 | 3.74e-01 | 93.6% | 51.9% |
| 4nurA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.58 | 40.0 | 3.02e-01 | 85.1% | 26.7% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 46.0 | 4.58e-01 | 100.0% | 92.5% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 48.0 | 4.56e-01 | 95.7% | 82.1% |
| 2cfuA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.58 | 40.0 | 3.01e-01 | 83.0% | 26.4% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.57 | 41.0 | 2.89e-01 | 83.0% | 80.7% |
| 4axhA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.57 | 40.0 | 3.02e-01 | 83.0% | 26.6% |
| 2kjpA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.56 | 43.0 | 3.66e-01 | 85.1% | 63.3% |
| 3oa4A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 44.0 | 3.31e-01 | 93.6% | 42.1% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.55 | 41.0 | 2.96e-01 | 83.0% | 83.4% |
| 2m7oA00 | 3.10.450.400 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 | 0.55 | 41.0 | 3.73e-01 | 87.2% | 61.4% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.55 | 45.0 | 3.59e-01 | 100.0% | 66.0% |
| 2lezA00 | 3.30.2450.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 | 0.54 | 41.0 | 3.17e-01 | 87.2% | 77.5% |
| 3besR01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 40.0 | 3.41e-01 | 83.0% | 73.5% |
| 4ntqB00 | 3.30.2450.20 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.53 | 38.0 | 2.91e-01 | 85.1% | 97.9% |
| 1khdD02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.53 | 45.0 | 2.94e-01 | 100.0% | 54.3% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 42.0 | 3.26e-01 | 95.7% | 60.3% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 37.0 | 3.20e-01 | 80.9% | 91.1% |
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.52 | 42.0 | 4.06e-01 | 93.6% | 100.0% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 39.0 | 3.54e-01 | 95.7% | 81.0% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.52 | 44.0 | 3.84e-01 | 100.0% | 74.3% |
| 4gafB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.19e-01 | 93.6% | 59.1% |
ECOD (93)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3987601 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 70.0 | 6.92e-01 | 95.7% | 94.0% |
| 3617960 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.79 | 55.0 | 3.94e-01 | 74.5% | 82.2% |
| 5054047 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.77 | 63.0 | 5.38e-01 | 91.5% | 76.0% |
| 3673136 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.76 | 60.0 | 4.16e-01 | 85.1% | 93.8% |
| 4882787 | 375.1.1.67 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N | 0.74 | 54.0 | 5.46e-01 | 78.7% | 91.5% |
| 1214535 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.74 | 53.0 | 4.88e-01 | 83.0% | 58.1% |
| 3692341 | 2003.1.2.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like | 0.74 | 56.0 | 3.34e-01 | 83.0% | 31.5% |
| 4862766 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 55.0 | 4.72e-01 | 83.0% | 64.9% |
| 4566577 | 330.16.1.3 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain › CEP19 | 0.73 | 58.0 | 4.58e-01 | 87.2% | 66.3% |
| 4664970 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 54.0 | 5.51e-01 | 80.9% | 95.6% |
| 4937122 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.72 | 63.0 | 5.38e-01 | 97.9% | 89.3% |
| 3507010 | 3794.1.2.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase | 0.71 | 53.0 | 4.09e-01 | 80.9% | 85.7% |
| 3491188 | 149.1.1.0 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 | 0.71 | 51.0 | 3.02e-01 | 83.0% | 10.3% |
| 3958326 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.71 | 57.0 | 3.66e-01 | 97.9% | 20.0% |
| 3303656 | 2.1.1.157 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB2 | 0.70 | 59.0 | 4.27e-01 | 95.7% | 74.1% |
| 4680459 | 375.1.1.67 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NrdR-like_N | 0.70 | 51.0 | 5.26e-01 | 80.9% | 95.6% |
| 3895500 | 6129.1.1.11 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › ITI_HC_C | 0.70 | 58.0 | 3.67e-01 | 93.6% | 86.7% |
| 4938769 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.69 | 53.0 | 4.29e-01 | 83.0% | 66.7% |
| 1144827 | 4.1.1.79 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3601 | 0.69 | 60.0 | 4.93e-01 | 100.0% | 76.4% |
| 3558557 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.69 | 53.0 | 4.52e-01 | 83.0% | 72.0% |
| 4519674 | 4.1.1.186 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5397 | 0.69 | 58.0 | 5.45e-01 | 97.9% | 87.9% |
| 3947431 | 3454.1.1.2 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › T2SSC | 0.69 | 53.0 | 4.82e-01 | 85.1% | 90.8% |
| 5028546 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 51.0 | 4.55e-01 | 83.0% | 64.3% |
| 4941620 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 59.0 | 5.53e-01 | 100.0% | 81.7% |
| 4427477 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 4.72e-01 | 100.0% | 53.7% |
| 4953069 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.68 | 58.0 | 4.28e-01 | 95.7% | 78.4% |
| 3390564 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.68 | 56.0 | 4.43e-01 | 95.7% | 51.4% |
| 3695540 | 2003.1.3.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2, NAD_binding_8 | 0.68 | 61.0 | 3.92e-01 | 100.0% | 46.3% |
| 3738473 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.68 | 51.0 | 3.87e-01 | 85.1% | 72.5% |
| 4337720 | 3454.1.1.2 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › T2SSC | 0.68 | 60.0 | 5.37e-01 | 100.0% | 95.4% |
| 4644747 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.68 | 53.0 | 4.48e-01 | 87.2% | 70.0% |
| 4567415 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 54.0 | 4.35e-01 | 93.6% | 58.0% |
| 3887511 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 54.0 | 4.35e-01 | 93.6% | 58.0% |
| 4340612 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.67 | 51.0 | 4.61e-01 | 83.0% | 66.2% |
| 3925891 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 52.0 | 4.16e-01 | 83.0% | 54.4% |
| 4394424 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 54.0 | 4.32e-01 | 93.6% | 59.0% |
| 5078242 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.67 | 57.0 | 4.23e-01 | 100.0% | 79.2% |
| 3408974 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 52.0 | 4.30e-01 | 91.5% | 62.1% |
| 3514663 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.67 | 54.0 | 4.78e-01 | 95.7% | 78.7% |
| 4514268 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.67 | 56.0 | 4.59e-01 | 95.7% | 71.9% |
| 1270135 | 2003.1.2.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like | 0.66 | 60.0 | 4.00e-01 | 100.0% | 74.6% |
| 3696046 | 2003.1.3.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 | 0.66 | 59.0 | 3.64e-01 | 100.0% | 41.2% |
| 4089084 | 2003.1.2.60 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO, NAD_binding_8 | 0.66 | 59.0 | 3.59e-01 | 100.0% | 37.1% |
| 3167693 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.66 | 56.0 | 3.22e-01 | 97.9% | 9.8% |
| 3503377 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.66 | 53.0 | 4.28e-01 | 95.7% | 55.2% |
| 3574641 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.66 | 52.0 | 3.37e-01 | 87.2% | 22.9% |
| 3722080 | 2003.1.3.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › NAD_binding_8 | 0.66 | 59.0 | 3.58e-01 | 100.0% | 36.8% |
| 5044036 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.65 | 55.0 | 4.00e-01 | 95.7% | 76.3% |
| 4024735 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.65 | 55.0 | 4.91e-01 | 100.0% | 82.9% |
| 3686561 | 2003.1.2.102 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 | 0.65 | 58.0 | 3.32e-01 | 100.0% | 23.0% |
| 3720660 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 56.0 | 4.86e-01 | 100.0% | 77.3% |
| 3515433 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.65 | 52.0 | 4.82e-01 | 95.7% | 87.7% |
| 5021659 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.65 | 55.0 | 4.48e-01 | 95.7% | 98.9% |
| 3911301 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.65 | 52.0 | 4.44e-01 | 95.7% | 63.5% |
| 3729284 | 2003.1.2.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like | 0.64 | 57.0 | 3.43e-01 | 100.0% | 34.5% |
| 4955570 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.64 | 45.0 | 2.89e-01 | 83.0% | 14.4% |
| 4642895 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 49.0 | 3.64e-01 | 87.2% | 47.7% |
| 4641867 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.63 | 48.0 | 3.46e-01 | 87.2% | 55.0% |
| 3659258 | 2003.1.2.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_3 | 0.63 | 56.0 | 3.96e-01 | 100.0% | 74.3% |
| 4173773 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.63 | 53.0 | 4.42e-01 | 95.7% | 76.2% |
| 4621153 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 54.0 | 5.06e-01 | 100.0% | 83.3% |
| 3923839 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 51.0 | 4.58e-01 | 95.7% | 85.7% |
| 3408941 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.63 | 50.0 | 4.38e-01 | 95.7% | 76.2% |
| 5059777 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 55.0 | 3.77e-01 | 100.0% | 38.2% |
| 4486857 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.63 | 47.0 | 3.46e-01 | 83.0% | 78.5% |
| 3655368 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.63 | 49.0 | 4.42e-01 | 95.7% | 80.0% |
| 4930470 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.62 | 51.0 | 4.32e-01 | 95.7% | 76.5% |
| 591 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.62 | 54.0 | 4.65e-01 | 100.0% | 76.3% |
| 3722885 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.62 | 55.0 | 3.14e-01 | 100.0% | 29.7% |
| 5062762 | 2.1.1.127 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 | 0.62 | 50.0 | 3.95e-01 | 95.7% | 69.1% |
| 3692757 | 2003.1.2.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.62 | 54.0 | 3.11e-01 | 100.0% | 34.1% |
| 5044376 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.62 | 46.0 | 2.76e-01 | 80.9% | 40.3% |
| 4459163 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.62 | 51.0 | 3.82e-01 | 95.7% | 51.2% |
| None | — | 0.61 | 53.0 | 3.13e-01 | 100.0% | 25.5% | |
| 3731474 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.61 | 53.0 | 3.23e-01 | 100.0% | 36.3% |
| 3768845 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.60 | 46.0 | 3.50e-01 | 80.9% | 56.2% |
| 3749345 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 48.0 | 4.15e-01 | 93.6% | 71.2% |
| 3639522 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.59 | 50.0 | 3.10e-01 | 100.0% | 49.1% |
| 5051933 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 47.0 | 3.35e-01 | 97.9% | 37.1% |
| 3922240 | 3755.3.1.321 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WHAMM-JMY_N | 0.58 | 44.0 | 3.45e-01 | 87.2% | 84.5% |
| 4961329 | 2003.1.3.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase | 0.57 | 48.0 | 2.98e-01 | 100.0% | 41.0% |
| 5009170 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 45.0 | 4.02e-01 | 95.7% | 88.0% |
| 3287903 | 802.1.1.1 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom | 0.56 | 43.0 | 4.25e-01 | 87.2% | 86.0% |
| 3252808 | 1170.1.2.0 ↗ | beta barrels › IL8-related › IL8-related › chemokine-related domain in glycoprotein L (gL) | 0.56 | 48.0 | 4.30e-01 | 100.0% | 71.4% |
| 3890372 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 41.0 | 3.30e-01 | 85.1% | 52.7% |
| 4241371 | 211.1.1.7 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_4 | 0.55 | 43.0 | 3.22e-01 | 93.6% | 40.0% |
| 4028916 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.54 | 46.0 | 3.63e-01 | 100.0% | 62.7% |
| 3735661 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.54 | 44.0 | 3.56e-01 | 100.0% | 87.6% |
| 4027723 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.54 | 43.0 | 3.88e-01 | 93.6% | 85.7% |
| 4324055 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.54 | 46.0 | 2.66e-01 | 100.0% | 28.7% |
| 5034929 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.52 | 44.0 | 2.90e-01 | 100.0% | 57.0% |
| 5042834 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.52 | 41.0 | 3.04e-01 | 97.9% | 68.0% |
| 3783181 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 37.0 | 3.03e-01 | 87.2% | 80.9% |
D2
medium
residues 69-158