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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00402
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00402
Identity
- Kingdom:
- phage
Quality
86.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-85
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wadA01 | 6.20.70.10 | Special › Other non-globular › Ubiquitin Ligase Nedd4; Chain: W; › | 0.84 | 28.0 | 4.58e-01 | 100.0% | 86.7% |
| 2yh9B00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.69 | 31.0 | 3.46e-01 | 100.0% | 52.9% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.59 | 29.0 | 3.78e-01 | 100.0% | 87.0% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 38.0 | 4.20e-01 | 100.0% | 84.6% |
| 3mahA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 44.0 | 4.72e-01 | 84.5% | 100.0% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 46.0 | 4.39e-01 | 88.1% | 96.0% |
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 29.0 | 2.74e-01 | 70.2% | 36.2% |
| 2p1wA01 | 3.30.2430.10 | Alpha Beta › 2-Layer Sandwich › Phosphothreonine lyase fold › phosphothreonine lyase | 0.56 | 49.0 | 3.87e-01 | 100.0% | 72.4% |
| 6lpnA03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 48.0 | 4.35e-01 | 96.4% | 89.5% |
| 3pm9A03 | 3.30.70.2190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 46.0 | 4.05e-01 | 94.0% | 83.5% |
| 1eerC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.45e-01 | 100.0% | 60.8% |
| 2zyzB01 | 3.40.1170.20 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › tRNA intron endonuclease, N-terminal domain | 0.53 | 40.0 | 3.99e-01 | 100.0% | 79.5% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 42.0 | 4.11e-01 | 89.3% | 100.0% |
| 2j0wA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 39.0 | 4.15e-01 | 83.3% | 100.0% |
| 3aqpA02 | 3.30.70.3220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 44.0 | 3.63e-01 | 97.6% | 97.5% |
| 2lxiA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 42.0 | 4.11e-01 | 90.5% | 96.7% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 45.0 | 4.34e-01 | 100.0% | 93.9% |
| 3pyfA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.51 | 43.0 | 3.69e-01 | 94.0% | 95.6% |
| 3tm4A01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.51 | 44.0 | 3.45e-01 | 98.8% | 96.3% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 3.91e-01 | 88.1% | 97.9% |
| 6fezA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 34.0 | 3.27e-01 | 100.0% | 60.6% |
| 4dddA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 41.0 | 3.54e-01 | 90.5% | 94.2% |
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 40.0 | 3.99e-01 | 85.7% | 98.8% |
| 3gv5B01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.50 | 44.0 | 3.86e-01 | 100.0% | 99.2% |
| 2yweA03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.50 | 40.0 | 4.10e-01 | 96.4% | 90.2% |
| 4tqrA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.50 | 43.0 | 4.17e-01 | 100.0% | 96.9% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.50 | 41.0 | 4.19e-01 | 90.5% | 100.0% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028279 | 308.1.1.2 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related › ClpS | 0.61 | 52.0 | 4.70e-01 | 95.2% | 67.0% |
| 5021731 | 304.33.1.1 ↗ | a+b two layers › Alpha-beta plaits › CheY-binding domain of CheA › CheY-binding domain of CheA › P2 | 0.60 | 48.0 | 4.81e-01 | 86.9% | 97.6% |
| 3589932 | 308.2.1.1 ↗ | a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain › PBP_dimer | 0.59 | 45.0 | 3.84e-01 | 83.3% | 98.6% |
| 4959109 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.58 | 45.0 | 4.64e-01 | 92.9% | 88.7% |
| 5026555 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.57 | 42.0 | 4.60e-01 | 81.0% | 100.0% |
| 5016326 | 304.33.1.1 ↗ | a+b two layers › Alpha-beta plaits › CheY-binding domain of CheA › CheY-binding domain of CheA › P2 | 0.57 | 44.0 | 4.39e-01 | 82.1% | 97.6% |
| 3978396 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 44.0 | 4.14e-01 | 82.1% | 98.0% |
| 3710757 | 304.163.1.1 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 | 0.57 | 43.0 | 4.69e-01 | 81.0% | 100.0% |
| 5078619 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.56 | 41.0 | 4.49e-01 | 79.8% | 100.0% |
| 3567908 | 304.120.1.10 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF25904 | 0.56 | 42.0 | 4.53e-01 | 82.1% | 98.6% |
| 4947922 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.55 | 40.0 | 4.36e-01 | 82.1% | 100.0% |
| 4358940 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.55 | 42.0 | 4.25e-01 | 83.3% | 95.3% |
| 3477586 | 304.120.1.10 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF25904 | 0.55 | 43.0 | 4.55e-01 | 92.9% | 98.7% |
| 4952659 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.54 | 42.0 | 4.53e-01 | 83.3% | 100.0% |
| 5261 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.54 | 42.0 | 4.14e-01 | 84.5% | 86.8% |
| 3742864 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 43.0 | 3.92e-01 | 85.7% | 67.3% |
| 3670094 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.53 | 37.0 | 3.69e-01 | 72.6% | 71.1% |
| 3191211 | 304.8.1.21 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 | 0.53 | 41.0 | 4.13e-01 | 83.3% | 94.1% |
| 4130739 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.53 | 43.0 | 4.30e-01 | 91.7% | 91.1% |
| 4949978 | 304.33.1.1 ↗ | a+b two layers › Alpha-beta plaits › CheY-binding domain of CheA › CheY-binding domain of CheA › P2 | 0.53 | 39.0 | 3.91e-01 | 82.1% | 84.4% |
| 3744164 | 304.9.1.6 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 | 0.53 | 42.0 | 3.57e-01 | 85.7% | 69.6% |
| 4946301 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 38.0 | 3.63e-01 | 100.0% | 65.0% |
| 5029083 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 43.0 | 3.61e-01 | 92.9% | 75.3% |
| 4006107 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.52 | 41.0 | 4.31e-01 | 91.7% | 96.0% |
| 3968877 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 40.0 | 4.23e-01 | 90.5% | 94.7% |
| 3307901 | 304.7.1.20 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › MBTP1_N | 0.52 | 39.0 | 4.19e-01 | 81.0% | 100.0% |
| 3439268 | 304.9.1.6 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Smg4_UPF3 | 0.52 | 42.0 | 3.69e-01 | 90.5% | 70.8% |
| 3828199 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.52 | 35.0 | 3.53e-01 | 73.8% | 69.4% |
| 3726512 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 38.0 | 3.92e-01 | 81.0% | 88.7% |
| 5071848 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.51 | 40.0 | 4.06e-01 | 92.9% | 87.1% |
| 3973565 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.50 | 41.0 | 3.89e-01 | 91.7% | 93.0% |