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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00520
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00520
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-102
Domain cluster:
rep: MT028491.1__QIG65719.1__phiOC_p053__00053__DFULL
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05488.19 best | PAAR_motif | 30.7 | 3.80e-07 | 68.3% | 78.6% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jivD00 | 2.60.200.60 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.86 | 74.0 | 7.71e-01 | 100.0% | 96.8% |
| 4ku0D00 | 2.60.200.60 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.84 | 73.0 | 7.56e-01 | 100.0% | 95.8% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 40.0 | 4.13e-01 | 96.0% | 64.9% |
| 4dq2A03 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 32.0 | 4.37e-01 | 92.1% | 100.0% |
| 2mc2A00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.61 | 53.0 | 4.20e-01 | 96.0% | 100.0% |
| 1xzzA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.60 | 53.0 | 4.15e-01 | 98.0% | 99.5% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 38.0 | 3.98e-01 | 97.0% | 70.2% |
| 3mcaA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 41.0 | 4.14e-01 | 96.0% | 70.6% |
| 5e6tA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.59 | 34.0 | 3.55e-01 | 98.0% | 60.6% |
| 2wyrB02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.59 | 37.0 | 4.01e-01 | 96.0% | 75.3% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 38.0 | 4.40e-01 | 99.0% | 90.5% |
| 4n0rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 33.0 | 3.54e-01 | 97.0% | 65.9% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.56 | 35.0 | 3.44e-01 | 94.1% | 57.8% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 3.58e-01 | 97.0% | 61.1% |
| 3cpxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.55 | 34.0 | 4.16e-01 | 96.0% | 100.0% |
| 1f60A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 40.0 | 3.97e-01 | 96.0% | 74.1% |
| 2gtlO02 | 2.40.128.620 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 47.0 | 4.01e-01 | 97.0% | 75.5% |
| 3cp7A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 38.0 | 3.70e-01 | 75.2% | 91.0% |
| 3p26A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 39.0 | 3.87e-01 | 96.0% | 74.5% |
| 1vhoA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.51 | 30.0 | 3.44e-01 | 93.1% | 77.9% |
| 2kieA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.51 | 42.0 | 3.96e-01 | 95.0% | 74.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5056459 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.96 | 61.0 | 7.69e-01 | 73.3% | 100.0% |
| 3948150 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.92 | 70.0 | 7.84e-01 | 100.0% | 98.8% |
| 3949323 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.90 | 71.0 | 7.80e-01 | 100.0% | 97.6% |
| 5059112 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.86 | 74.0 | 7.74e-01 | 97.0% | 95.7% |
| 2631812 | 3174.3.1.0 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein | 0.86 | 67.0 | 7.26e-01 | 100.0% | 94.3% |
| 1088866 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.86 | 74.0 | 7.71e-01 | 100.0% | 96.8% |
| 4995813 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.86 | 69.0 | 7.29e-01 | 100.0% | 93.3% |
| 4957571 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.86 | 82.0 | 7.37e-01 | 100.0% | 96.9% |
| 4890674 | 3174.3.1.0 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein | 0.85 | 72.0 | 7.50e-01 | 100.0% | 96.7% |
| 1292784 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.84 | 73.0 | 7.56e-01 | 100.0% | 95.8% |
| 3966552 | 3174.3.1.1 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein › PAAR_motif | 0.82 | 74.0 | 7.33e-01 | 100.0% | 89.5% |
| 3972966 | 3174.3.1.0 ↗ | beta barrels › Ribosomal protein L14-like › PAAR-repeat protein › PAAR-repeat protein | 0.78 | 72.0 | 6.38e-01 | 99.0% | 97.1% |
| 3936430 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 38.0 | 4.19e-01 | 97.0% | 67.5% |
| 3866038 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.68 | 37.0 | 4.05e-01 | 95.0% | 63.5% |
| 3660358 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 37.0 | 4.68e-01 | 95.0% | 93.3% |
| 4949848 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.66 | 36.0 | 4.62e-01 | 98.0% | 96.4% |
| 4932427 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.66 | 38.0 | 3.99e-01 | 97.0% | 63.3% |
| 4129006 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.65 | 40.0 | 4.12e-01 | 96.0% | 64.2% |
| 3999480 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.64 | 39.0 | 4.26e-01 | 96.0% | 72.9% |
| 3300074 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 35.0 | 4.49e-01 | 95.0% | 100.0% |
| 3566270 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.63 | 39.0 | 4.11e-01 | 96.0% | 68.9% |
| 5083379 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.62 | 38.0 | 4.02e-01 | 96.0% | 69.7% |
| 4988964 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 36.0 | 3.89e-01 | 98.0% | 69.4% |
| 140913 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.60 | 41.0 | 4.20e-01 | 96.0% | 72.0% |
| 5020442 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.59 | 38.0 | 3.92e-01 | 97.0% | 69.5% |
| 1563513 | 1.1.8.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Ski7_3rd | 0.58 | 39.0 | 3.92e-01 | 96.0% | 65.4% |
| 4816090 | 6.1.1.15 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Ins145_P3_rec | 0.58 | 52.0 | 4.02e-01 | 99.0% | 98.2% |
| 4961202 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.58 | 35.0 | 3.74e-01 | 96.0% | 67.8% |
| 3848399 | 4.8.1.24 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th | 0.58 | 36.0 | 4.21e-01 | 95.0% | 91.4% |
| 5056826 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.57 | 33.0 | 3.95e-01 | 97.0% | 89.2% |
| 5081442 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.56 | 33.0 | 3.83e-01 | 97.0% | 82.9% |
| 4948433 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.56 | 33.0 | 3.84e-01 | 97.0% | 85.3% |
| 3387846 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.56 | 35.0 | 3.31e-01 | 99.0% | 51.7% |
| 3339861 | 9.3.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N | 0.54 | 48.0 | 3.95e-01 | 98.0% | 81.4% |
| 3598857 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.54 | 41.0 | 3.84e-01 | 96.0% | 66.7% |
| 3219717 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.53 | 39.0 | 4.13e-01 | 81.2% | 85.6% |
| 1934779 | 9.22.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Putative lipid binding protein BT_2261 › Putative lipid binding protein BT_2261 › Lipid_bd | 0.53 | 46.0 | 4.14e-01 | 98.0% | 89.0% |
| 3578245 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.52 | 41.0 | 3.84e-01 | 97.0% | 70.0% |
| 5000165 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.51 | 35.0 | 2.50e-01 | 70.3% | 67.4% |
| 3180074 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.51 | 37.0 | 3.81e-01 | 97.0% | 81.1% |
| 3737967 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.50 | 43.0 | 3.59e-01 | 98.0% | 76.8% |