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Filtrate_w_scaffold_1_prodigal-single.1__X__X__00533
Bact-VirFiltrate_w_scaffold_1_prodigal-single.1__X__X__00533
Identity
- Kingdom:
- phage
Quality
62.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-140
D2
high
residues 151-245
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v6zM00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.82 | 48.0 | 5.38e-01 | 92.6% | 74.7% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.72 | 43.0 | 4.56e-01 | 89.5% | 67.5% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 43.0 | 4.58e-01 | 89.5% | 68.7% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.67 | 59.0 | 5.07e-01 | 95.8% | 98.0% |
| 1wtyA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.67 | 50.0 | 4.63e-01 | 76.8% | 98.3% |
| 1o0wA01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.67 | 58.0 | 4.93e-01 | 94.7% | 98.7% |
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 43.0 | 4.86e-01 | 89.5% | 90.0% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 49.0 | 3.72e-01 | 81.1% | 64.0% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 51.0 | 4.41e-01 | 88.4% | 68.5% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.62 | 44.0 | 4.56e-01 | 100.0% | 81.4% |
| 4nt1A00 | 1.10.3520.10 | Mainly Alpha › Orthogonal Bundle › Glycolipid transfer protein, GLTP › Glycolipid transfer protein | 0.62 | 45.0 | 3.48e-01 | 75.8% | 84.0% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.61 | 47.0 | 3.86e-01 | 83.2% | 82.3% |
| 2q14B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.61 | 51.0 | 3.83e-01 | 90.5% | 89.7% |
| 6f7hA00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.59 | 41.0 | 3.10e-01 | 72.6% | 71.7% |
| 4fczA00 | 3.10.450.710 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Tgt2/MlaC | 0.59 | 46.0 | 3.84e-01 | 87.4% | 88.0% |
| 3e7qA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 53.0 | 4.08e-01 | 100.0% | 85.6% |
| 2k3nA00 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.58 | 40.0 | 3.45e-01 | 91.6% | 43.1% |
| 1f4qA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.57 | 40.0 | 3.40e-01 | 90.5% | 43.5% |
| 1q0gA00 | 1.20.120.400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nickel-containing superoxide dismutase | 0.56 | 43.0 | 4.00e-01 | 80.0% | 76.9% |
| 3behB01 | 1.20.120.540 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels | 0.55 | 40.0 | 3.77e-01 | 75.8% | 76.9% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.55 | 41.0 | 3.80e-01 | 78.9% | 77.5% |
| 1v1gA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 39.0 | 3.09e-01 | 80.0% | 37.8% |
| 2dg8D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 44.0 | 3.61e-01 | 88.4% | 67.1% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 39.0 | 3.52e-01 | 96.8% | 56.7% |
| 5h0pA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.50 | 35.0 | 3.50e-01 | 86.3% | 67.6% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3580179 | 103.11.1.1 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N | 0.78 | 54.0 | 6.12e-01 | 70.5% | 95.7% |
| 5082532 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 54.0 | 6.13e-01 | 73.7% | 98.6% |
| 4024018 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.76 | 52.0 | 4.65e-01 | 70.5% | 51.5% |
| 5059610 | 148.1.3.403 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RNA_pol_Rpb1_5 | 0.75 | 52.0 | 4.37e-01 | 74.7% | 43.9% |
| 4089409 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 46.0 | 4.93e-01 | 91.6% | 72.5% |
| 3385989 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.72 | 43.0 | 4.88e-01 | 89.5% | 80.0% |
| 4246144 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 43.0 | 4.69e-01 | 90.5% | 71.2% |
| 3586538 | 148.1.3.35 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TOR1A_C | 0.72 | 51.0 | 5.19e-01 | 85.3% | 74.5% |
| 3171709 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.69 | 57.0 | 4.81e-01 | 90.5% | 98.1% |
| 4121495 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 39.0 | 4.34e-01 | 96.8% | 70.7% |
| 4986565 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.67 | 49.0 | 4.36e-01 | 76.8% | 86.7% |
| 3244215 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 38.0 | 4.57e-01 | 89.5% | 88.3% |
| 5056040 | 5052.1.1.0 ↗ | alpha complex topology › Proton glutamate symport protein › Proton glutamate symport protein › Proton glutamate symport protein | 0.66 | 53.0 | 3.81e-01 | 87.4% | 73.7% |
| 5049791 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.64 | 49.0 | 4.27e-01 | 80.0% | 84.3% |
| 4036498 | 601.7.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HepT-like | 0.64 | 49.0 | 4.39e-01 | 81.1% | 90.8% |
| 3539926 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.63 | 48.0 | 3.63e-01 | 81.1% | 63.1% |
| 3487282 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.62 | 50.0 | 3.86e-01 | 86.3% | 59.0% |
| 3246395 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.62 | 50.0 | 3.89e-01 | 87.4% | 60.0% |
| 3278820 | 191.1.1.48 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_46 | 0.61 | 50.0 | 4.67e-01 | 90.5% | 89.2% |
| 3788346 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 53.0 | 3.23e-01 | 93.7% | 42.4% |
| 3896580 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.59 | 49.0 | 3.67e-01 | 89.5% | 54.7% |
| 4971954 | 604.39.1.3 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF-ribofla_trS | 0.59 | 41.0 | 3.36e-01 | 73.7% | 64.3% |
| 3761039 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.58 | 50.0 | 3.65e-01 | 92.6% | 52.2% |
| 3728552 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.57 | 46.0 | 4.31e-01 | 86.3% | 92.2% |
| 5022013 | 632.7.1.61 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › BREX_BrxC_helical | 0.57 | 45.0 | 4.21e-01 | 86.3% | 80.8% |
| 4976228 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.55 | 46.0 | 4.72e-01 | 87.4% | 95.6% |
| 3949012 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.55 | 39.0 | 3.39e-01 | 74.7% | 58.7% |
| 3991092 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 41.0 | 4.05e-01 | 80.0% | 72.4% |
| 3924238 | 3722.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain | 0.54 | 44.0 | 3.26e-01 | 86.3% | 34.9% |
| 3856774 | 110.1.1.18 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › Death_Lrrd1 | 0.54 | 46.0 | 3.95e-01 | 93.7% | 82.4% |
| 4941837 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.54 | 41.0 | 3.70e-01 | 80.0% | 74.6% |
| 4991064 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.53 | 45.0 | 2.91e-01 | 89.5% | 23.1% |
| 3282001 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.53 | 45.0 | 3.05e-01 | 94.7% | 80.0% |
| 4007956 | 5069.1.1.61 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › PF28674 | 0.52 | 40.0 | 3.54e-01 | 81.1% | 88.3% |
| 5051430 | 632.1.1.2 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › BE_C | 0.52 | 40.0 | 3.70e-01 | 82.1% | 95.0% |
| 3408095 | 108.1.1.30 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_8 | 0.51 | 42.0 | 3.35e-01 | 87.4% | 61.1% |