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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00004
Bact-VirFiltrate_w_scaffold_3_prodigal-single.1__X__X__00004
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-99
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t95A01 | 3.30.1250.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical 12.0 Kda Protein In Nam8-gar1 Intergenic Region; Chain: A; › Ribosome maturation protein SBDS, N-terminal domain | 0.67 | 36.0 | 3.97e-01 | 86.5% | 63.7% |
| 1wxrA03 | 3.30.160.280 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 34.0 | 3.77e-01 | 89.6% | 71.1% |
| 2kdoA01 | 3.30.1250.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical 12.0 Kda Protein In Nam8-gar1 Intergenic Region; Chain: A; › Ribosome maturation protein SBDS, N-terminal domain | 0.55 | 32.0 | 3.23e-01 | 87.5% | 53.5% |
| 3qdfA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.51 | 26.0 | 3.11e-01 | 87.5% | 74.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947072 | 251.1.1.2 ↗ | a+b two layers › FYSH domain › FYSH domain › FYSH domain › SBDS_domain_II | 0.66 | 36.0 | 3.93e-01 | 87.5% | 63.7% |
| 5000806 | 251.1.1.1 ↗ | a+b two layers › FYSH domain › FYSH domain › FYSH domain › SBDS | 0.53 | 38.0 | 3.66e-01 | 77.1% | 89.6% |
| 3360654 | 376.1.3.57 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_ULT1 | 0.52 | 30.0 | 3.71e-01 | 82.3% | 100.0% |