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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00023

Bact-Vir

Filtrate_w_scaffold_3_prodigal-single.1__X__X__00023

Identity

Kingdom:
phage

Quality

82.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-72
PDB
Domain cluster: representative
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1jsxA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 52.0 3.68e-01 78.8% 69.9%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 54.0 5.16e-01 86.4% 93.4%
3n0vA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.68 53.0 4.94e-01 86.4% 92.9%
2qmwA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 52.0 5.04e-01 86.4% 96.1%
1qzzA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 49.0 3.65e-01 78.8% 86.4%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 52.0 4.73e-01 86.4% 82.2%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 54.0 4.92e-01 93.9% 88.3%
6toaF01 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.65 49.0 3.92e-01 80.3% 63.8%
2rrnA01 3.30.70.2040 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 5.06e-01 93.9% 90.4%
2rb7A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 54.0 4.62e-01 92.4% 92.5%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 53.0 4.99e-01 90.9% 92.6%
4h4kA01 3.30.70.2940 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 50.0 4.58e-01 84.8% 89.9%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.64 47.0 3.77e-01 80.3% 59.6%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.63 52.0 4.72e-01 90.9% 86.5%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 52.0 4.76e-01 92.4% 93.2%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 45.0 3.32e-01 78.8% 78.3%
3cedA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 52.0 4.66e-01 95.5% 83.7%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 51.0 4.69e-01 92.4% 90.7%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 45.0 3.23e-01 78.8% 83.2%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 50.0 4.76e-01 90.9% 94.9%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.62 46.0 3.37e-01 78.8% 36.8%
1j6wA00 3.30.1360.80 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) 0.62 53.0 4.08e-01 100.0% 82.0%
2f7vA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 51.0 4.35e-01 92.4% 93.5%
3nrbB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 50.0 4.67e-01 90.9% 92.8%
3fn2A00 3.30.2200.10 Alpha Beta › 2-Layer Sandwich › histidine kinase doma clostridium symbiosum atcc 14940 › histidine kinase doma clostridium symbiosum atcc 14940 0.62 45.0 4.00e-01 78.8% 79.4%
3gb0A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 50.0 4.26e-01 92.4% 93.8%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 49.0 4.25e-01 90.9% 93.5%
3onrJ00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.61 42.0 4.25e-01 72.7% 86.8%
4qu7A00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 46.0 4.43e-01 86.4% 90.1%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 44.0 3.32e-01 78.8% 84.8%
3g88A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 49.0 3.43e-01 93.9% 69.0%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 48.0 4.11e-01 93.9% 69.0%
3io1A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 48.0 4.07e-01 92.4% 92.2%
4m3sA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 43.0 3.32e-01 78.8% 55.3%
4pg4B03 3.30.70.3100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 46.0 4.53e-01 90.9% 90.7%
5f2kB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 42.0 3.06e-01 78.8% 84.6%
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.59 48.0 4.22e-01 93.9% 81.9%
2k3iA01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 50.0 4.66e-01 98.5% 98.8%
4pbdA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 3.86e-01 81.8% 80.4%
5lslA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 45.0 4.26e-01 84.8% 98.7%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.58 45.0 3.47e-01 84.8% 62.8%
3q0bX00 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.58 42.0 3.32e-01 78.8% 54.7%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 43.0 3.89e-01 80.3% 93.5%
4lubB01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 43.0 3.75e-01 78.8% 93.0%
2qswA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 48.0 4.37e-01 93.9% 86.7%
6h8oA00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.58 49.0 4.43e-01 98.5% 68.4%
2nzcB00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.58 45.0 4.34e-01 90.9% 88.9%
2w9hA00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.57 42.0 3.23e-01 78.8% 75.2%
3pfoA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 3.76e-01 90.9% 96.1%
4u9rA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 45.0 4.25e-01 89.4% 96.3%
6bq9A02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.57 42.0 3.81e-01 81.8% 77.7%
1f0xA04 3.30.1370.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › D-lactate dehydrogenase, cap domain, subdomain 2 0.57 44.0 4.19e-01 90.9% 83.5%
7qh2C03 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 43.0 4.20e-01 87.9% 94.9%
1mruA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 41.0 3.72e-01 78.8% 88.0%
3qw9B00 2.60.40.4100 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain 0.56 48.0 3.69e-01 100.0% 80.7%
3ix9A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.56 41.0 3.08e-01 78.8% 74.7%
3gz7B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 44.0 3.97e-01 92.4% 89.8%
2y8yA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.56 44.0 3.79e-01 90.9% 88.7%
2w59A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.18e-01 100.0% 90.0%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 42.0 3.85e-01 81.8% 73.6%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 4.17e-01 100.0% 85.6%
2od5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.39e-01 71.2% 65.9%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 40.0 3.27e-01 78.8% 69.0%
2fbjH02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.85e-01 78.8% 80.8%
1v9kA00 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.55 45.0 3.28e-01 100.0% 58.1%
2petA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 46.0 3.94e-01 100.0% 86.2%
5qinA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 41.0 3.79e-01 81.8% 91.8%
3so6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 37.0 3.01e-01 72.7% 75.2%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.70e-01 95.5% 76.2%
6lpnA04 3.30.70.2740 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 43.0 3.94e-01 93.9% 84.2%
1y0hB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 45.0 3.98e-01 95.5% 87.8%
2pziB02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 40.0 3.22e-01 83.3% 99.3%
1ao8A00 3.40.430.10 Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A 0.53 39.0 2.97e-01 78.8% 75.9%
2b3tA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 37.0 2.84e-01 78.8% 85.9%
3p0tA00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.53 37.0 3.12e-01 78.8% 71.3%
3lpxB02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.53 43.0 3.94e-01 97.0% 80.9%
4of8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 3.97e-01 100.0% 87.4%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.53 44.0 2.94e-01 97.0% 48.1%
1t7vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 45.0 4.10e-01 100.0% 90.0%
1dr9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 4.02e-01 100.0% 85.3%
6x4tA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 4.02e-01 97.0% 94.1%
5a2fA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 44.0 3.80e-01 100.0% 85.7%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 37.0 2.91e-01 78.8% 79.1%
1txkB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 3.70e-01 98.5% 85.2%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.79e-01 100.0% 83.5%
1ej6A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.92e-01 100.0% 90.5%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.50 41.0 3.32e-01 100.0% 77.9%
ECOD (93)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3838547 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.71 57.0 5.37e-01 86.4% 91.1%
3357573 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 59.0 4.96e-01 92.4% 76.4%
5073608 304.16.1.0 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like 0.70 57.0 5.25e-01 90.9% 92.0%
4378921 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.70 51.0 3.62e-01 78.8% 65.9%
5026971 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.69 54.0 5.01e-01 86.4% 94.1%
5005586 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.69 56.0 5.23e-01 90.9% 91.8%
330634 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.69 56.0 5.10e-01 90.9% 90.1%
4504111 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.69 56.0 5.27e-01 89.4% 92.5%
5039693 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.69 57.0 5.17e-01 92.4% 93.3%
4170481 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.69 57.0 5.19e-01 92.4% 93.3%
5038047 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.68 52.0 4.87e-01 83.3% 92.8%
5062146 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.68 52.0 4.83e-01 83.3% 91.7%
4634052 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.68 56.0 5.14e-01 92.4% 93.2%
4458779 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.68 55.0 4.96e-01 90.9% 87.2%
4512374 304.8.1.22 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.68 53.0 4.92e-01 86.4% 89.4%
5052977 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.67 55.0 5.08e-01 92.4% 93.2%
5035224 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.67 55.0 5.04e-01 92.4% 93.3%
4948334 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.67 55.0 5.04e-01 92.4% 92.0%
3988189 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 57.0 5.35e-01 93.9% 92.5%
3512169 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 55.0 4.98e-01 90.9% 83.3%
3650582 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 50.0 5.01e-01 81.8% 97.1%
4599322 304.8.1.1 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.67 55.0 5.04e-01 93.9% 82.2%
3950550 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.66 55.0 5.20e-01 92.4% 96.2%
3804539 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 53.0 4.53e-01 89.4% 68.2%
4263573 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.66 53.0 5.16e-01 89.4% 100.0%
4067121 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.66 53.0 4.97e-01 90.9% 90.6%
5022932 304.130.1.1 a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion 0.66 53.0 5.00e-01 92.4% 89.4%
4047960 304.16.1.1 a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE 0.66 53.0 4.96e-01 92.4% 95.3%
4006594 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.66 54.0 5.07e-01 92.4% 94.0%
3164010 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.66 53.0 5.04e-01 90.9% 95.0%
3458742 304.8.1.1 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.65 53.0 4.69e-01 89.4% 76.8%
4033935 304.8.1.22 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.65 53.0 5.12e-01 90.9% 100.0%
4020643 304.8.1.1 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.65 54.0 4.84e-01 93.9% 83.2%
3784654 304.8.1.1 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.65 54.0 4.82e-01 92.4% 79.8%
3839866 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.65 52.0 4.75e-01 89.4% 97.8%
4994637 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 55.0 4.83e-01 95.5% 77.0%
3436180 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 51.0 5.04e-01 86.4% 97.1%
4953681 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.65 53.0 5.00e-01 90.9% 92.5%
4094504 309.1.2.0 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain 0.65 46.0 3.69e-01 75.8% 88.1%
4987718 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.64 53.0 5.04e-01 93.9% 95.0%
4319369 304.8.1.1 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.64 52.0 4.80e-01 93.9% 85.6%
3970545 310.3.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM 0.64 45.0 4.30e-01 75.8% 72.2%
4977203 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.64 54.0 4.90e-01 95.5% 85.6%
4524601 304.117.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC › Sec_GG 0.63 52.0 5.04e-01 93.9% 89.3%
5043329 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 51.0 4.78e-01 93.9% 91.8%
4549948 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.63 53.0 4.40e-01 95.5% 65.8%
4478614 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 50.0 4.64e-01 90.9% 87.5%
3178364 319.1.1.19 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF29696 0.62 45.0 3.96e-01 78.8% 94.3%
4043221 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 53.0 4.53e-01 97.0% 72.7%
3672469 304.55.1.18 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › ACT 0.62 53.0 4.22e-01 95.5% 78.7%
4044335 304.52.1.1 a+b two layers › Alpha-beta plaits › YbeD/HP0495-like › YbeD/HP0495-like › DUF493 0.62 52.0 4.84e-01 100.0% 95.5%
3329478 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 53.0 4.39e-01 95.5% 62.5%
3653904 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 52.0 4.92e-01 93.9% 92.5%
3426902 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 52.0 4.71e-01 97.0% 100.0%
4390550 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.62 52.0 4.51e-01 95.5% 73.3%
4292806 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.62 52.0 4.52e-01 95.5% 72.4%
None 0.62 51.0 3.52e-01 92.4% 68.9%
4428119 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.62 51.0 3.56e-01 92.4% 71.1%
3167746 304.9.1.71 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD 0.62 50.0 3.96e-01 93.9% 66.0%
4319057 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.62 45.0 3.78e-01 78.8% 80.0%
None 0.61 51.0 3.51e-01 92.4% 70.4%
4238391 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 51.0 4.32e-01 95.5% 67.0%
3642698 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.61 43.0 4.68e-01 74.2% 100.0%
4666632 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 49.0 4.34e-01 90.9% 83.0%
3321864 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.61 51.0 4.40e-01 97.0% 70.0%
3366280 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.61 52.0 4.59e-01 97.0% 78.0%
4064787 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.61 54.0 4.80e-01 100.0% 83.2%
3471665 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.59 44.0 4.32e-01 78.8% 74.3%
3348724 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.59 48.0 4.18e-01 93.9% 87.6%
3193786 1.1.7.24 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.57 48.0 3.84e-01 95.5% 72.9%
3943170 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.57 42.0 3.83e-01 78.8% 71.1%
3578869 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 48.0 3.19e-01 93.9% 50.7%
4169399 304.14.1.1 a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR 0.57 43.0 4.19e-01 87.9% 97.5%
3605323 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.57 48.0 2.93e-01 95.5% 34.4%
4202370 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 46.0 4.08e-01 93.9% 78.0%
None 0.56 40.0 2.92e-01 78.8% 95.7%
4591715 304.102.1.5 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 0.56 46.0 3.31e-01 100.0% 62.6%
3754692 11.1.1.333 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YLDV-IL18BP-like 0.54 46.0 4.01e-01 100.0% 82.7%
3933376 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 3.96e-01 100.0% 85.5%
3595234 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 44.0 3.89e-01 97.0% 79.1%
3536111 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.53 46.0 3.68e-01 100.0% 65.7%
3412911 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.53 45.0 3.85e-01 100.0% 82.6%
3909833 206.1.1.87 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, RIO1 0.53 43.0 2.88e-01 93.9% 47.2%
3513459 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.53 45.0 3.98e-01 100.0% 83.8%
3863258 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.53 45.0 3.90e-01 97.0% 84.8%
3926163 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 44.0 2.91e-01 95.5% 48.9%
3507304 11.1.1.97 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set 0.52 44.0 3.83e-01 100.0% 81.8%
3265242 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 43.0 3.65e-01 100.0% 79.2%
3232555 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.51 42.0 3.17e-01 98.5% 68.4%
3461080 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 43.0 3.46e-01 100.0% 81.4%
3241973 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 42.0 3.79e-01 100.0% 87.0%
3408311 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 41.0 3.76e-01 100.0% 81.0%
3521494 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.50 41.0 2.82e-01 98.5% 52.9%
D2 high residues 82-156
PDB
CATH (82)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uv7A00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.80 70.0 7.02e-01 100.0% 94.7%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.80 74.0 5.94e-01 100.0% 89.0%
2rjzA02 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.77 69.0 6.27e-01 100.0% 89.9%
5tvfD00 3.60.90.10 Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase 0.72 54.0 3.63e-01 80.0% 61.1%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.71 51.0 4.97e-01 76.0% 73.2%
2raqA01 3.30.70.1340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain 0.70 58.0 5.57e-01 89.3% 80.0%
5fiiB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.70 51.0 5.11e-01 78.7% 83.3%
2rhqB06 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.70 48.0 4.67e-01 72.0% 83.1%
1lq9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.70 52.0 4.61e-01 81.3% 75.0%
4pg4B03 3.30.70.3100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 51.0 5.19e-01 90.7% 80.0%
2dgxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.68 49.0 4.82e-01 76.0% 77.5%
6gmhK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.68 50.0 4.36e-01 78.7% 52.2%
4pcqA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.68 50.0 4.82e-01 80.0% 70.2%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 50.0 4.94e-01 80.0% 79.7%
6ruiK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.67 49.0 4.47e-01 78.7% 60.2%
5xogK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.67 50.0 4.38e-01 80.0% 54.0%
4qjvB00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.67 50.0 4.67e-01 80.0% 64.9%
3wpwA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.67 58.0 4.72e-01 100.0% 97.3%
1xppD00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.66 49.0 4.43e-01 80.0% 58.4%
6vh5C03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 50.0 4.78e-01 82.7% 80.9%
2bj3D02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.66 54.0 5.29e-01 89.3% 82.7%
3d3bJ00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.65 50.0 4.77e-01 97.3% 70.1%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.65 49.0 4.85e-01 82.7% 80.2%
1jj2L00 3.40.1120.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal protein L15e › Ribosomal protein L15 0.65 50.0 3.71e-01 82.7% 52.6%
2f06A00 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.65 54.0 4.37e-01 92.0% 86.1%
4bhqA00 3.30.70.2830 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 56.0 5.02e-01 98.7% 93.6%
2dt9A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 47.0 4.64e-01 78.7% 86.1%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 47.0 4.70e-01 80.0% 86.1%
5ds1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 48.0 4.50e-01 80.0% 100.0%
2w59A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 47.0 4.33e-01 80.0% 69.0%
5wpjA02 3.30.70.420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain 0.63 51.0 4.59e-01 90.7% 85.2%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 47.0 4.61e-01 82.7% 78.8%
1k8wA01 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.63 49.0 3.48e-01 86.7% 42.7%
3c1mA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.63 48.0 3.79e-01 84.0% 71.3%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.62 48.0 4.59e-01 85.3% 80.9%
5cvdB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 56.0 3.97e-01 98.7% 69.9%
3kewB02 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.62 54.0 4.45e-01 100.0% 92.4%
3mwbB03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 50.0 4.73e-01 90.7% 74.7%
5i2cB01 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.62 44.0 3.54e-01 96.0% 38.4%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.62 52.0 4.09e-01 93.3% 78.8%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.62 51.0 4.82e-01 89.3% 77.5%
4opmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 48.0 3.23e-01 88.0% 65.6%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 54.0 4.00e-01 100.0% 85.9%
1ygyA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 45.0 4.52e-01 82.7% 86.8%
4z2yA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 53.0 3.81e-01 98.7% 76.6%
5wy8B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 3.98e-01 81.3% 72.3%
1iujA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 45.0 4.11e-01 81.3% 81.4%
2r11D00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 48.0 3.27e-01 89.3% 65.6%
4qdjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 54.0 3.92e-01 100.0% 68.3%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 48.0 4.62e-01 90.7% 82.6%
2go8A01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 39.0 3.94e-01 70.7% 67.6%
1vq8S00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 45.0 4.47e-01 82.7% 82.7%
4rv9A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 54.0 3.91e-01 100.0% 77.1%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 48.0 4.56e-01 93.3% 79.8%
1qzzA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 54.0 4.09e-01 100.0% 85.2%
5yppA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 47.0 4.51e-01 92.0% 78.9%
2vzyC00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 49.0 3.77e-01 97.3% 98.4%
2x3gA00 3.30.70.1910 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 49.0 4.33e-01 96.0% 66.4%
2i79D00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 49.0 3.92e-01 98.7% 70.7%
3ecrB03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.58 42.0 3.77e-01 100.0% 55.9%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 53.0 4.01e-01 98.7% 83.6%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 51.0 4.29e-01 98.7% 66.7%
4d9uA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 49.0 4.63e-01 98.7% 78.4%
4kvxA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 48.0 3.92e-01 96.0% 77.6%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.57 51.0 4.73e-01 98.7% 86.0%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 43.0 3.68e-01 81.3% 60.7%
4i8qA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.57 46.0 3.11e-01 90.7% 54.6%
1xdzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 51.0 3.56e-01 100.0% 60.1%
2pziB02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 41.0 3.41e-01 80.0% 69.7%
3c0wA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.56 47.0 4.09e-01 96.0% 65.0%
5mmiU01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.56 42.0 4.15e-01 82.7% 84.1%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 50.0 4.68e-01 100.0% 90.2%
2cy2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.55 47.0 3.66e-01 97.3% 66.1%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.55 46.0 3.89e-01 94.7% 59.4%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 47.0 4.54e-01 98.7% 83.9%
2rb7A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.54 46.0 3.30e-01 100.0% 95.7%
3g88A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 47.0 3.34e-01 100.0% 60.3%
3d2lA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.53 35.0 3.84e-01 100.0% 82.5%
2zvfA02 3.10.310.40 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.52 43.0 3.91e-01 94.7% 69.8%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.51 38.0 3.25e-01 100.0% 47.7%
3rheA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 37.0 3.29e-01 78.7% 90.4%
4q05A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 41.0 2.82e-01 97.3% 78.0%
ECOD (96)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030972 304.124.1.0 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.83 78.0 6.49e-01 100.0% 94.2%
3365317 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.83 61.0 6.00e-01 77.3% 72.5%
3815383 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.82 64.0 6.08e-01 81.3% 72.9%
4010403 310.3.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM 0.82 74.0 6.90e-01 100.0% 84.9%
3816023 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.81 59.0 5.84e-01 78.7% 72.5%
4112011 310.3.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM 0.81 74.0 6.92e-01 100.0% 86.7%
3973733 310.3.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM 0.80 73.0 6.49e-01 100.0% 84.8%
3817811 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.80 61.0 5.83e-01 81.3% 70.6%
3807253 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.80 60.0 5.89e-01 78.7% 73.8%
4239895 310.3.1.2 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › T2SSM 0.80 73.0 6.47e-01 100.0% 72.4%
4667438 304.8.1.53 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.79 61.0 4.71e-01 81.3% 41.3%
3367362 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.79 59.0 5.79e-01 80.0% 73.8%
3831627 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.79 59.0 5.79e-01 80.0% 73.8%
3302370 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.79 61.0 5.88e-01 81.3% 73.5%
3684532 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.79 59.0 5.76e-01 80.0% 73.8%
3367684 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.78 57.0 5.50e-01 80.0% 68.2%
3456962 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.78 60.0 5.77e-01 81.3% 72.6%
3464409 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.78 55.0 5.60e-01 76.0% 74.7%
3965787 304.8.1.53 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.77 58.0 4.60e-01 80.0% 41.3%
3451456 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.77 62.0 5.69e-01 98.7% 67.4%
3165990 310.3.1.22 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PF27480, PF30181 0.77 70.0 6.01e-01 100.0% 68.7%
4236566 304.8.1.65 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT, PF27446 0.77 58.0 4.80e-01 80.0% 47.7%
3367405 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.77 58.0 5.07e-01 80.0% 57.3%
4144909 304.8.1.53 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.77 59.0 4.42e-01 81.3% 37.1%
5027949 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.77 56.0 5.60e-01 77.3% 79.5%
3306325 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.77 58.0 5.44e-01 80.0% 67.8%
4549948 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.77 58.0 4.91e-01 80.0% 51.7%
3802901 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.77 56.0 5.66e-01 78.7% 77.3%
3653904 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 57.0 5.59e-01 78.7% 75.0%
4292806 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 58.0 5.18e-01 81.3% 60.0%
4261231 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 58.0 5.09e-01 81.3% 59.1%
4500983 304.8.1.53 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.76 58.0 4.49e-01 81.3% 39.4%
3382396 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 59.0 5.63e-01 81.3% 74.1%
4447510 304.8.1.53 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.76 58.0 4.58e-01 81.3% 42.0%
4298844 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 57.0 5.32e-01 81.3% 65.3%
4592207 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 58.0 4.60e-01 81.3% 44.1%
4274665 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.75 57.0 5.14e-01 81.3% 60.2%
4238391 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 57.0 4.94e-01 81.3% 55.7%
3305434 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 61.0 5.70e-01 98.7% 72.2%
4977203 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.75 51.0 4.80e-01 70.7% 58.9%
4062262 304.8.1.65 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT, PF27446 0.75 57.0 4.51e-01 81.3% 42.0%
4583308 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.75 57.0 4.34e-01 81.3% 37.1%
3332958 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.75 57.0 5.89e-01 81.3% 90.0%
4575908 304.8.1.53 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th 0.74 57.0 4.77e-01 81.3% 50.4%
3386922 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 56.0 5.55e-01 81.3% 81.2%
4300927 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 57.0 4.91e-01 81.3% 54.8%
3462522 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 56.0 4.70e-01 80.0% 48.8%
4665602 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 56.0 5.21e-01 81.3% 65.3%
3429644 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 57.0 4.44e-01 82.7% 40.0%
3678892 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.74 56.0 5.54e-01 81.3% 81.2%
3650337 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.74 56.0 4.67e-01 81.3% 48.5%
4194812 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.74 56.0 4.80e-01 81.3% 52.5%
3672469 304.55.1.18 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › ACT 0.74 56.0 4.60e-01 81.3% 70.6%
3368757 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.74 56.0 5.20e-01 81.3% 65.3%
4114421 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.74 56.0 5.00e-01 81.3% 60.0%
5013284 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.73 64.0 6.47e-01 100.0% 96.0%
3959682 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 55.0 5.60e-01 81.3% 82.7%
4623684 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 55.0 4.50e-01 81.3% 45.0%
3383244 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.73 55.0 4.60e-01 80.0% 48.8%
4545902 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 55.0 5.21e-01 81.3% 68.9%
3321864 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 55.0 4.84e-01 81.3% 59.1%
3832697 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.72 57.0 5.30e-01 93.3% 67.4%
3325750 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.72 52.0 5.18e-01 78.7% 72.5%
4247396 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.72 55.0 4.21e-01 81.3% 37.1%
4151808 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 55.0 4.83e-01 81.3% 57.3%
4656385 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.72 54.0 5.19e-01 80.0% 71.8%
4390550 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.72 54.0 4.88e-01 81.3% 60.0%
3314483 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.72 54.0 4.67e-01 80.0% 53.0%
4450775 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.72 54.0 4.87e-01 81.3% 59.6%
4354854 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 54.0 4.19e-01 81.3% 38.2%
4515771 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.71 54.0 4.92e-01 81.3% 62.0%
4500602 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 54.0 4.99e-01 81.3% 65.3%
4248471 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.71 54.0 5.10e-01 81.3% 68.9%
3367441 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 61.0 5.55e-01 100.0% 70.7%
4409327 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.71 53.0 4.81e-01 81.3% 59.0%
4494422 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.71 53.0 4.27e-01 81.3% 42.0%
4885937 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.71 53.0 5.06e-01 81.3% 68.9%
4940223 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.71 46.0 4.86e-01 70.7% 75.4%
3218711 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.71 53.0 4.79e-01 81.3% 63.8%
4398167 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.71 53.0 5.08e-01 81.3% 70.5%
5013279 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.70 60.0 6.03e-01 100.0% 94.7%
3804630 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 57.0 4.78e-01 88.0% 66.4%
4138832 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.70 53.0 5.03e-01 81.3% 69.7%
3366280 304.8.1.47 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR9_3rd 0.70 53.0 4.82e-01 81.3% 63.0%
3285929 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 53.0 4.99e-01 81.3% 68.9%
3164917 304.8.1.8 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 0.70 52.0 5.14e-01 80.0% 80.0%
3721769 304.8.1.22 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › AHAS-like_ACT 0.70 56.0 5.08e-01 92.0% 65.0%
5006953 873.1.1.12 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 0.67 58.0 5.30e-01 96.0% 78.0%
3667551 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 58.0 5.49e-01 96.0% 95.6%
3345132 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.66 56.0 4.89e-01 93.3% 74.8%
3434168 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.66 60.0 5.33e-01 98.7% 79.0%
3384789 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.66 60.0 5.24e-01 100.0% 78.2%
4342313 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.65 55.0 4.98e-01 92.0% 71.0%
5013605 304.165.1.0 a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 0.65 54.0 4.38e-01 93.3% 49.7%
4958905 241.5.1.2 a+b two layers › Type III secretory system chaperone-like › DNA-binding C-terminal domain of the transcription factor MotA › DNA-binding C-terminal domain of the transcription factor MotA › DUF1529 0.60 54.0 4.60e-01 100.0% 74.8%
286927 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.55 46.0 3.84e-01 94.7% 56.7%