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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00108
Bact-VirFiltrate_w_scaffold_3_prodigal-single.1__X__X__00108
Identity
- Kingdom:
- phage
Quality
93.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-93
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bs1A00 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.70 | 37.0 | 3.64e-01 | 78.5% | 46.6% |
| 1nf2A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.69 | 48.0 | 4.65e-01 | 73.1% | 95.3% |
| 2rbkA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.67 | 47.0 | 4.65e-01 | 74.2% | 99.0% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.65 | 35.0 | 3.24e-01 | 77.4% | 39.8% |
| 3pihA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 40.0 | 4.45e-01 | 72.0% | 97.2% |
| 1jw9B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 40.0 | 2.98e-01 | 71.0% | 83.7% |
| 4mz2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 3.82e-01 | 72.0% | 94.6% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 40.0 | 3.83e-01 | 94.6% | 62.0% |
| 4bfeC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 40.0 | 3.88e-01 | 73.1% | 93.4% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.57 | 27.0 | 3.35e-01 | 100.0% | 74.1% |
| 2pq0A02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.56 | 48.0 | 4.68e-01 | 96.8% | 86.0% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 42.0 | 3.99e-01 | 93.5% | 67.0% |
| 1rkqA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.55 | 49.0 | 4.74e-01 | 98.9% | 95.3% |
| 3dnpA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.55 | 50.0 | 4.67e-01 | 98.9% | 92.0% |
| 3daoA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.55 | 48.0 | 4.59e-01 | 98.9% | 93.6% |
| 3r4cA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.54 | 47.0 | 4.63e-01 | 96.8% | 97.0% |
| 4csqA00 | 2.30.29.190 | Mainly Beta › Roll › PH-domain like › | 0.54 | 45.0 | 4.24e-01 | 93.5% | 83.2% |
| 2o07A01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.54 | 31.0 | 3.62e-01 | 94.6% | 86.4% |
| 1fu0A00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.52 | 40.0 | 4.12e-01 | 91.4% | 89.7% |
| 2iw2A01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.52 | 36.0 | 2.90e-01 | 72.0% | 57.8% |
| 2vnuD04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 4.11e-01 | 88.2% | 92.4% |
| 2x8nA01 | 3.30.2020.40 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 | 0.51 | 33.0 | 3.27e-01 | 96.8% | 61.9% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 37.0 | 3.72e-01 | 94.6% | 77.2% |
| 1jelP00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.51 | 37.0 | 3.85e-01 | 78.5% | 89.4% |
| 3fzqA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.50 | 44.0 | 4.12e-01 | 98.9% | 94.8% |
| 3luuA00 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.50 | 34.0 | 3.50e-01 | 100.0% | 73.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3624498 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.72 | 47.0 | 4.25e-01 | 94.6% | 49.6% |
| 3987903 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.71 | 39.0 | 4.51e-01 | 78.5% | 75.4% |
| 4948490 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 43.0 | 4.74e-01 | 94.6% | 74.7% |
| 185084 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.71 | 37.0 | 4.53e-01 | 76.3% | 79.7% |
| 4973804 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.68 | 41.0 | 4.47e-01 | 84.9% | 73.3% |
| 5056976 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.67 | 43.0 | 4.26e-01 | 94.6% | 61.0% |
| 1280955 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.65 | 35.0 | 4.13e-01 | 77.4% | 77.0% |
| 3473109 | 220.1.1.247 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_34 | 0.65 | 41.0 | 5.01e-01 | 82.8% | 100.0% |
| 3953652 | 4317.1.1.0 ↗ | a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like | 0.63 | 35.0 | 4.07e-01 | 79.6% | 76.9% |
| 4980465 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 36.0 | 3.73e-01 | 82.8% | 57.8% |
| 3839883 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.63 | 43.0 | 3.17e-01 | 71.0% | 82.4% |
| 5013053 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 36.0 | 4.11e-01 | 90.3% | 78.6% |
| 3266702 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 42.0 | 4.29e-01 | 94.6% | 74.2% |
| 2387834 | 5.4.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like | 0.59 | 46.0 | 3.96e-01 | 84.9% | 54.9% |
| 5011976 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.59 | 40.0 | 2.91e-01 | 71.0% | 72.6% |
| 3378208 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.58 | 46.0 | 3.38e-01 | 84.9% | 62.5% |
| 3266831 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 41.0 | 4.09e-01 | 90.3% | 71.6% |
| 3949336 | 220.1.1.216 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Helicase_IV_N | 0.58 | 41.0 | 3.94e-01 | 93.5% | 63.6% |
| 3399079 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 40.0 | 3.76e-01 | 94.6% | 60.9% |
| 3694248 | 4224.1.1.1 ↗ | few secondary structure elements › CHY zinc finger › CHY zinc finger › CHY zinc finger › zf-CHY | 0.57 | 39.0 | 4.31e-01 | 89.2% | 93.2% |
| 3373180 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.56 | 44.0 | 3.25e-01 | 84.9% | 64.2% |
| 2076039 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.56 | 48.0 | 4.68e-01 | 96.8% | 86.0% |
| 3509508 | 220.1.1.44 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N | 0.56 | 41.0 | 4.07e-01 | 94.6% | 74.7% |
| 3251856 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.56 | 42.0 | 3.73e-01 | 78.5% | 62.1% |
| 5075225 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 42.0 | 3.91e-01 | 79.6% | 74.1% |
| 3963940 | 3012.1.1.0 ↗ | a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain | 0.56 | 47.0 | 4.63e-01 | 93.5% | 86.0% |
| 3936488 | 2004.1.1.47 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › G-alpha | 0.55 | 49.0 | 3.55e-01 | 98.9% | 88.4% |
| 3476014 | 220.1.1.155 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26658 | 0.55 | 40.0 | 3.97e-01 | 90.3% | 71.0% |
| 3521669 | 220.1.1.155 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26658 | 0.54 | 41.0 | 3.94e-01 | 94.6% | 69.5% |
| 3742641 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.54 | 41.0 | 3.94e-01 | 96.8% | 68.2% |
| 3924833 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 42.0 | 3.83e-01 | 94.6% | 63.3% |
| 4568147 | 322.1.1.1 ↗ | a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr | 0.54 | 39.0 | 4.00e-01 | 78.5% | 85.4% |
| 3609378 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 40.0 | 4.02e-01 | 97.8% | 77.9% |
| 4029737 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 43.0 | 2.56e-01 | 100.0% | 11.4% |
| 3942961 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 33.0 | 3.50e-01 | 83.9% | 70.0% |
| 3411942 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.52 | 41.0 | 3.65e-01 | 94.6% | 59.2% |
| 3407322 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.52 | 41.0 | 4.05e-01 | 94.6% | 78.0% |
| 3513810 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 44.0 | 3.93e-01 | 93.5% | 68.1% |
| 3931704 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.51 | 41.0 | 3.88e-01 | 94.6% | 72.7% |
| 3635699 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.51 | 35.0 | 3.34e-01 | 71.0% | 61.8% |
| 5009939 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 38.0 | 3.68e-01 | 94.6% | 70.5% |
| 3275009 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.51 | 41.0 | 3.56e-01 | 94.6% | 56.6% |
| 3890750 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 37.0 | 3.79e-01 | 94.6% | 78.9% |
| 3260374 | 220.1.1.43 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH | 0.50 | 38.0 | 3.81e-01 | 97.8% | 79.6% |