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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00110
Bact-VirFiltrate_w_scaffold_3_prodigal-single.1__X__X__00110
Identity
- Kingdom:
- phage
Quality
89.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-42
Domain cluster:
representative
D2
medium
residues 51-86
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 57.0 | 4.18e-01 | 91.7% | 32.1% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.68 | 51.0 | 2.92e-01 | 100.0% | 8.0% |
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.64 | 45.0 | 4.16e-01 | 83.3% | 100.0% |
| 5e0sB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.64 | 47.0 | 3.09e-01 | 94.4% | 48.3% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 45.0 | 3.49e-01 | 91.7% | 33.0% |
| 5oomK00 | 3.90.1180.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 | 0.63 | 48.0 | 3.10e-01 | 83.3% | 41.2% |
| 1xexB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 49.0 | 3.26e-01 | 91.7% | 22.4% |
| 3o8oF01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 46.0 | 2.95e-01 | 91.7% | 51.1% |
| 5i7pA02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 46.0 | 4.40e-01 | 91.7% | 81.2% |
| 1i24A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 45.0 | 2.80e-01 | 88.9% | 12.7% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 44.0 | 3.54e-01 | 97.2% | 75.8% |
| 3emiA00 | 3.90.1780.10 | Alpha Beta › Alpha-Beta Complex › Trimeric adhesin › Trimeric adhesin | 0.59 | 38.0 | 2.70e-01 | 91.7% | 20.9% |
| 3pe5A00 | 3.40.630.190 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › LCP protein | 0.58 | 45.0 | 2.78e-01 | 100.0% | 18.8% |
| 2lqkA00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 41.0 | 3.47e-01 | 83.3% | 68.6% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 42.0 | 3.23e-01 | 91.7% | 31.4% |
| 1vw4H00 | 3.90.1180.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 | 0.56 | 47.0 | 3.15e-01 | 94.4% | 49.3% |
| 2ewlA00 | 3.30.160.330 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.54 | 36.0 | 3.38e-01 | 75.0% | 58.9% |
| 1z1yA01 | 2.90.20.10 | Mainly Beta › Orthogonal Prism › Plasmodium vivax P25 fold › Plasmodium vivax P25 domain | 0.53 | 37.0 | 2.50e-01 | 77.8% | 69.4% |
| 4ijaA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 44.0 | 2.92e-01 | 100.0% | 36.7% |
| 3vwoA02 | 2.10.70.40 | Mainly Beta › Ribbon › Complement Module; domain 1 › peptidoglycan hydrolase | 0.52 | 37.0 | 3.42e-01 | 80.6% | 56.9% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 39.0 | 3.39e-01 | 91.7% | 73.8% |
| 1ce7A02 | 4.10.470.10 | Few Secondary Structures › Irregular › Ricin (A Subunit), domain 2 › Ricin (A Subunit), domain 2 | 0.52 | 35.0 | 3.09e-01 | 91.7% | 53.2% |
| 2yrvA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 41.0 | 3.04e-01 | 100.0% | 49.6% |
| 2b0aA00 | 3.50.30.50 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Putative cyclase | 0.51 | 37.0 | 2.48e-01 | 83.3% | 74.7% |
| 3g1nA02 | 3.30.2160.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.51 | 41.0 | 3.22e-01 | 91.7% | 96.2% |
| 3oesA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 2.66e-01 | 100.0% | 86.6% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5062171 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.90 | 69.0 | 4.43e-01 | 100.0% | 20.0% |
| 3808578 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.82 | 68.0 | 5.32e-01 | 91.7% | 48.6% |
| 3394225 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.82 | 66.0 | 4.61e-01 | 91.7% | 29.6% |
| 3406351 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.80 | 66.0 | 4.61e-01 | 91.7% | 30.9% |
| 3470265 | 101.1.9.114 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Prefoldin_2 | 0.77 | 60.0 | 5.07e-01 | 91.7% | 53.8% |
| 3935332 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.76 | 62.0 | 4.28e-01 | 94.4% | 26.9% |
| 3594965 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.76 | 62.0 | 4.16e-01 | 94.4% | 25.0% |
| 3550136 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.75 | 59.0 | 4.20e-01 | 91.7% | 31.3% |
| 5044803 | 2498.1.1.6 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3 | 0.75 | 54.0 | 2.96e-01 | 75.0% | 4.7% |
| 4017372 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.75 | 59.0 | 4.19e-01 | 91.7% | 31.3% |
| 3593339 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.74 | 58.0 | 4.13e-01 | 91.7% | 31.3% |
| 3712081 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.74 | 58.0 | 4.19e-01 | 91.7% | 30.9% |
| 3228583 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.74 | 58.0 | 4.15e-01 | 91.7% | 29.6% |
| 3579472 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.73 | 58.0 | 4.01e-01 | 91.7% | 27.7% |
| 4112182 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 54.0 | 3.89e-01 | 91.7% | 30.5% |
| 3463181 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 51.0 | 4.18e-01 | 80.6% | 60.0% |
| 5069500 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 59.0 | 3.85e-01 | 100.0% | 72.0% |
| 4980445 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 59.0 | 3.91e-01 | 100.0% | 82.1% |
| 5062314 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 57.0 | 3.77e-01 | 100.0% | 72.7% |
| 3260588 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 47.0 | 4.29e-01 | 77.8% | 58.0% |
| 4950268 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.65 | 51.0 | 4.36e-01 | 86.1% | 68.3% |
| 3454986 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.64 | 52.0 | 2.88e-01 | 100.0% | 26.7% |
| 4181293 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 48.0 | 3.58e-01 | 91.7% | 32.7% |
| 3265501 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 43.0 | 3.93e-01 | 72.2% | 47.3% |
| 3529995 | 226.1.1.4 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB_2 | 0.61 | 45.0 | 3.27e-01 | 80.6% | 28.7% |
| 4190551 | 513.1.1.1 ↗ | a+b two layers › Obg GTP-binding protein C-terminal domain-like › Obg GTP-binding protein C-terminal domain › Obg GTP-binding protein C-terminal domain › DUF1967 | 0.61 | 38.0 | 2.86e-01 | 97.2% | 23.5% |
| 3270436 | 226.1.1.4 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB_2 | 0.60 | 47.0 | 3.53e-01 | 100.0% | 32.1% |
| 3352870 | 207.1.1.135 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT_2, LRR_14 | 0.59 | 48.0 | 2.65e-01 | 100.0% | 78.8% |
| 3717403 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.59 | 41.0 | 2.40e-01 | 77.8% | 8.3% |
| 3351959 | 207.1.1.102 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1+LRR_8+LRR_14 | 0.59 | 48.0 | 2.59e-01 | 100.0% | 17.3% |
| 3928082 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.58 | 40.0 | 2.47e-01 | 75.0% | 10.6% |
| None | — | 0.58 | 45.0 | 2.73e-01 | 100.0% | 49.7% | |
| 3467633 | 207.1.1.60 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1,LRRNT_2,LRR_8 | 0.57 | 46.0 | 2.51e-01 | 100.0% | 22.7% |
| 3326915 | 207.1.1.142 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_4, LRR_6, LRR_8 | 0.57 | 47.0 | 2.62e-01 | 100.0% | 28.8% |
| 5078037 | 304.139.1.2 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › RAMPs | 0.56 | 46.0 | 2.77e-01 | 97.2% | 15.1% |
| 3295711 | 207.1.1.163 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT_2, LRR_6, LRR_8, LRR_14 | 0.55 | 46.0 | 2.48e-01 | 100.0% | 20.0% |
| 3460073 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.54 | 43.0 | 2.45e-01 | 94.4% | 24.8% |
| 3250474 | 109.1.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_3 | 0.54 | 40.0 | 2.74e-01 | 100.0% | 31.9% |
| 5058037 | 2003.1.2.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase | 0.54 | 40.0 | 2.27e-01 | 77.8% | 56.7% |
| 3483430 | 60.1.2.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain | 0.53 | 37.0 | 2.23e-01 | 77.8% | 9.5% |
| 3454464 | 60.1.2.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C | 0.52 | 39.0 | 2.38e-01 | 88.9% | 21.6% |
| 3430270 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.52 | 44.0 | 3.52e-01 | 100.0% | 78.7% |
| 5034274 | 4951.1.1.0 ↗ | alpha arrays › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit | 0.51 | 36.0 | 3.34e-01 | 91.7% | 85.0% |
| 3716939 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.51 | 41.0 | 3.41e-01 | 100.0% | 82.7% |
| 4026899 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.51 | 40.0 | 2.56e-01 | 94.4% | 33.5% |
| 3582376 | 2003.1.2.34 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Prenylcys_lyase | 0.50 | 36.0 | 2.25e-01 | 75.0% | 22.1% |
| 3430287 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.50 | 36.0 | 2.18e-01 | 77.8% | 26.2% |