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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00112
Bact-VirFiltrate_w_scaffold_3_prodigal-single.1__X__X__00112
Identity
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-94
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ktgA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.66 | 49.0 | 4.14e-01 | 80.5% | 63.5% |
| 3a6sA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.65 | 49.0 | 4.20e-01 | 81.8% | 64.8% |
| 5cfjA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.63 | 47.0 | 3.92e-01 | 80.5% | 64.3% |
| 5c6dA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 46.0 | 4.12e-01 | 80.5% | 79.4% |
| 3gwyB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 45.0 | 3.78e-01 | 80.5% | 63.9% |
| 2wzpR03 | 3.30.1920.20 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Phage tail base-plate attachment protein, domain D3 | 0.56 | 40.0 | 3.97e-01 | 83.1% | 71.2% |
| 6u7tA03 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 41.0 | 3.62e-01 | 80.5% | 63.6% |
| 4uyiA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.54 | 35.0 | 2.98e-01 | 81.8% | 39.4% |
| 4k4kA01 | 2.60.40.2620 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.53 | 43.0 | 3.73e-01 | 93.5% | 78.7% |
| 4qdgA01 | 2.60.40.2100 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 43.0 | 3.45e-01 | 93.5% | 69.7% |
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.52 | 25.0 | 2.86e-01 | 96.1% | 54.5% |
| 2e87A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.83e-01 | 88.3% | 30.8% |
| 6r8gB02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.51 | 35.0 | 2.79e-01 | 71.4% | 80.0% |
| 5lm7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 3.92e-01 | 100.0% | 83.3% |
| 3qwnD01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.50 | 40.0 | 4.13e-01 | 100.0% | 95.7% |
| 3vl9B00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.50 | 40.0 | 3.05e-01 | 93.5% | 66.1% |
| 1ixrA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 36.0 | 3.94e-01 | 100.0% | 95.2% |
| 1dkiA02 | 3.30.910.30 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Peptidase C10 family | 0.50 | 40.0 | 3.41e-01 | 93.5% | 73.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024576 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.65 | 49.0 | 4.06e-01 | 81.8% | 61.4% |
| 3722180 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.65 | 50.0 | 3.83e-01 | 83.1% | 61.1% |
| 3386938 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.61 | 46.0 | 4.18e-01 | 80.5% | 63.5% |
| 4942594 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.59 | 43.0 | 3.76e-01 | 77.9% | 64.2% |
| 3738600 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.59 | 45.0 | 3.84e-01 | 81.8% | 66.4% |
| 3740137 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.59 | 45.0 | 3.86e-01 | 81.8% | 69.2% |
| 1124162 | 3071.1.1.4 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Caud_bapl16_3rd | 0.56 | 40.0 | 3.88e-01 | 83.1% | 67.1% |
| 4989491 | 3174.2.1.0 ↗ | beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA | 0.55 | 42.0 | 4.39e-01 | 84.4% | 94.3% |
| 3503674 | 7516.1.1.13 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_7C,Glyco_transf_7N | 0.55 | 42.0 | 2.93e-01 | 83.1% | 70.4% |
| 5059050 | 221.10.1.0 ↗ | a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain | 0.53 | 39.0 | 4.17e-01 | 81.8% | 92.3% |
| 4654417 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.52 | 40.0 | 3.66e-01 | 81.8% | 79.0% |
| 3618613 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.51 | 39.0 | 3.07e-01 | 85.7% | 41.1% |