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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00138
Bact-VirFiltrate_w_scaffold_3_prodigal-single.1__X__X__00138
Identity
- Kingdom:
- phage
Quality
69.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-108
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tadD01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.62 | 28.0 | 3.45e-01 | 78.3% | 66.0% |
| 1ui0A00 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 0.58 | 40.0 | 3.14e-01 | 72.3% | 74.5% |
| 4h5uA00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.52 | 37.0 | 2.55e-01 | 75.9% | 29.4% |
D2
high
residues 119-189
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ht4A00 | 3.30.930.30 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › | 0.66 | 51.0 | 3.75e-01 | 84.5% | 90.2% |
| 2xhsA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.56 | 45.0 | 3.16e-01 | 90.1% | 32.5% |
| 6jgwA01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.55 | 36.0 | 2.99e-01 | 90.1% | 38.8% |
| 2yleA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 44.0 | 3.54e-01 | 98.6% | 89.5% |
| 2eo0B00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.54 | 41.0 | 3.47e-01 | 83.1% | 70.2% |
| 2wh5A00 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.54 | 43.0 | 4.05e-01 | 90.1% | 75.6% |
| 2cjjA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 38.0 | 4.01e-01 | 93.0% | 85.7% |
| 6ks6G01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.50 | 43.0 | 2.98e-01 | 98.6% | 88.1% |
| 3p9dG01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.50 | 42.0 | 2.99e-01 | 98.6% | 89.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2880851 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.73 | 34.0 | 2.73e-01 | 83.1% | 24.1% |
| 3060784 | 4163.1.2.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like › Sld5 | 0.53 | 35.0 | 3.05e-01 | 95.8% | 41.5% |
| 3418862 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.53 | 31.0 | 2.63e-01 | 100.0% | 33.3% |
| 3218622 | 108.1.1.200 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30342 | 0.53 | 31.0 | 2.83e-01 | 91.5% | 43.2% |
| 3717770 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.52 | 41.0 | 3.00e-01 | 93.0% | 91.9% |
| 3656083 | 1075.1.1.21 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane+PDR_assoc | 0.51 | 43.0 | 2.62e-01 | 100.0% | 92.1% |