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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00143

Bact-Vir

Filtrate_w_scaffold_3_prodigal-single.1__X__X__00143

Identity

Kingdom:
phage

Quality

86.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-75
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r89A04 3.30.70.1550 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Archaeal tRNA CCA-adding enzyme catalytic domain 0.55 28.0 3.35e-01 87.7% 77.3%
2i4lA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.54 40.0 2.59e-01 78.1% 65.9%
4makB00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 44.0 4.40e-01 100.0% 89.5%
4i6xA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 40.0 3.51e-01 93.2% 54.7%
2zw2A00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.51 43.0 4.13e-01 94.5% 91.8%
2jg0A00 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.51 38.0 2.39e-01 84.9% 47.1%
4mz0B05 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.51 40.0 4.14e-01 95.9% 91.0%
4qjvA03 3.30.70.3110 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 36.0 3.88e-01 94.5% 90.3%
2cuwA00 3.30.1280.10 Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS 0.50 42.0 4.10e-01 94.5% 90.4%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4947559 304.56.1.0 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.54 45.0 4.18e-01 95.9% 73.3%
5058294 304.24.1.6 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › SBDS_C 0.51 41.0 4.24e-01 94.5% 92.9%
4945605 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.51 40.0 4.25e-01 93.2% 96.9%
4951020 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.50 41.0 4.18e-01 93.2% 91.4%