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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00249

Bact-Vir

Filtrate_w_scaffold_3_prodigal-single.1__X__X__00249

Identity

Kingdom:
phage

Quality

79.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 110-251
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7c2fB01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.62 28.0 3.57e-01 78.2% 69.8%
1un2A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.60 54.0 4.93e-01 97.2% 76.3%
4alzA03 3.30.70.1770 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 24.0 3.24e-01 73.9% 75.0%
1j72A01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.56 27.0 3.08e-01 78.2% 56.9%
7whfC01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.55 29.0 3.42e-01 77.5% 71.7%
1zczA02 3.40.140.20 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain 0.53 36.0 3.94e-01 100.0% 82.9%
1d2oA01 2.60.40.1140 Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain 0.53 29.0 3.30e-01 78.9% 69.2%
3fg6A01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.53 26.0 3.06e-01 77.5% 63.6%
4qbnA00 3.40.1350.10 Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › 0.52 30.0 3.58e-01 86.6% 84.9%
3i7jA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 39.0 3.17e-01 79.6% 67.0%
3ievA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 41.0 3.79e-01 90.1% 67.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937576 2485.1.1.41 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.70 63.0 5.48e-01 95.8% 81.5%
4942133 2485.1.1.41 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_4 0.68 61.0 5.63e-01 95.8% 81.7%
4377130 327.13.1.0 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system 0.56 22.0 3.30e-01 72.5% 83.3%
5083761 2492.1.1.5 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › AICARFT_IMPCHas 0.55 39.0 4.03e-01 100.0% 77.0%