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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00268
Bact-VirFiltrate_w_scaffold_3_prodigal-single.1__X__X__00268
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-85
Domain cluster:
rep: S20_GE20_scaffold_13766_prodigal-single.1__X__X__00003__D41-125
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ng6A01 | 1.10.1510.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Protein Yqey; Chain: A; domain1 › Uncharacterised protein YqeY/AIM41, N-terminal domain | 0.88 | 82.0 | 7.99e-01 | 100.0% | 95.6% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.76 | 45.0 | 4.95e-01 | 85.9% | 71.8% |
| 1yxrA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.75 | 48.0 | 5.17e-01 | 75.3% | 75.7% |
| 5c9eB01 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.71 | 46.0 | 4.61e-01 | 81.2% | 64.4% |
| 3fajA00 | 1.20.120.950 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 | 0.70 | 52.0 | 4.89e-01 | 96.5% | 65.3% |
| 4dloB02 | 1.25.40.610 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.69 | 41.0 | 3.65e-01 | 80.0% | 41.9% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.69 | 44.0 | 4.49e-01 | 82.4% | 66.3% |
| 2ap3A00 | 1.20.120.570 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like | 0.68 | 46.0 | 3.51e-01 | 70.6% | 50.0% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 51.0 | 4.88e-01 | 81.2% | 83.3% |
| 2ehwA00 | 6.10.140.1220 | Special › Helix non-globular › Helix Hairpins › | 0.65 | 49.0 | 4.40e-01 | 78.8% | 73.0% |
| 2vk9A03 | 1.10.3730.30 | Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › | 0.65 | 45.0 | 4.32e-01 | 71.8% | 70.4% |
| 3rc3A05 | 1.20.58.1080 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 44.0 | 3.97e-01 | 80.0% | 52.2% |
| 3b0cW00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.65 | 47.0 | 5.05e-01 | 75.3% | 100.0% |
| 1nafA02 | 1.20.58.160 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 47.0 | 4.76e-01 | 77.6% | 78.8% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 46.0 | 3.51e-01 | 76.5% | 42.6% |
| 3a98A02 | 1.20.1270.350 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Dedicator of cytokinesis N-terminal subdomain | 0.62 | 48.0 | 4.78e-01 | 100.0% | 78.2% |
| 1xzpA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.62 | 50.0 | 4.03e-01 | 87.1% | 51.8% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.62 | 56.0 | 5.02e-01 | 96.5% | 94.7% |
| 2qwoB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.60 | 46.0 | 4.56e-01 | 82.4% | 84.8% |
| 7k36H01 | 1.20.140.30 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › MOB kinase activator | 0.59 | 50.0 | 4.13e-01 | 97.6% | 89.0% |
| 3h36A00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.58 | 41.0 | 4.29e-01 | 81.2% | 83.3% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 51.0 | 4.25e-01 | 100.0% | 78.8% |
| 2wb7A03 | 1.20.120.870 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › pT26-6p, five-helical bundle domain | 0.57 | 51.0 | 4.29e-01 | 95.3% | 63.2% |
| 1rypL00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.57 | 48.0 | 3.64e-01 | 100.0% | 37.7% |
| 1eqzF00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.57 | 48.0 | 4.41e-01 | 89.4% | 72.9% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.57 | 50.0 | 4.53e-01 | 100.0% | 94.0% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.56 | 39.0 | 3.36e-01 | 71.8% | 94.0% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 49.0 | 4.40e-01 | 98.8% | 85.0% |
| 7ekoO01 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.56 | 48.0 | 3.96e-01 | 95.3% | 77.3% |
| 3p5jB02 | 1.10.20.120 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.56 | 39.0 | 3.75e-01 | 71.8% | 89.6% |
| 7csoA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.56 | 50.0 | 3.70e-01 | 100.0% | 63.2% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.56 | 40.0 | 3.27e-01 | 75.3% | 62.0% |
| 3ha4B00 | 1.20.58.690 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 46.0 | 4.08e-01 | 90.6% | 78.3% |
| 5y27A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.54 | 45.0 | 4.30e-01 | 89.4% | 78.6% |
| 4csrA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.54 | 45.0 | 4.52e-01 | 90.6% | 88.6% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.54 | 40.0 | 3.96e-01 | 100.0% | 77.5% |
| 2qgmA03 | 1.20.1440.30 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Biosynthetic Protein domain | 0.54 | 45.0 | 4.07e-01 | 91.8% | 97.4% |
| 4gyvE00 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.52 | 46.0 | 3.45e-01 | 100.0% | 65.6% |
| 1pu6A01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.51 | 38.0 | 3.70e-01 | 78.8% | 78.7% |
| 2x8aA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.51 | 42.0 | 4.34e-01 | 87.1% | 93.8% |
| 3qsgA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.50 | 43.0 | 3.87e-01 | 95.3% | 67.8% |
| 3mpxA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.50 | 42.0 | 3.21e-01 | 94.1% | 83.0% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3973839 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.90 | 83.0 | 6.77e-01 | 97.6% | 58.3% |
| 3285617 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.90 | 84.0 | 6.74e-01 | 100.0% | 57.1% |
| 3960575 | 610.4.1.0 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain | 0.90 | 84.0 | 6.79e-01 | 100.0% | 58.7% |
| 4262515 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.90 | 84.0 | 7.89e-01 | 100.0% | 87.0% |
| 3178110 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.89 | 84.0 | 6.56e-01 | 100.0% | 52.7% |
| 3386043 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.89 | 82.0 | 6.76e-01 | 100.0% | 59.3% |
| 3248 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.88 | 82.0 | 6.65e-01 | 100.0% | 58.8% |
| 4337422 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.87 | 82.0 | 6.41e-01 | 100.0% | 51.8% |
| 4361189 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.86 | 80.0 | 6.20e-01 | 100.0% | 54.1% |
| 3742733 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.84 | 78.0 | 7.39e-01 | 100.0% | 87.8% |
| 4015513 | 610.4.1.1 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain › YqeY | 0.84 | 78.0 | 6.32e-01 | 100.0% | 57.3% |
| 3635885 | 109.4.1.18 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPTA | 0.77 | 50.0 | 3.90e-01 | 81.2% | 32.9% |
| 3540634 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.75 | 52.0 | 4.49e-01 | 100.0% | 46.9% |
| 4975476 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.69 | 53.0 | 4.39e-01 | 82.4% | 84.7% |
| 5003499 | 109.3.1.484 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF2238 | 0.65 | 56.0 | 4.03e-01 | 94.1% | 64.6% |
| 4459896 | 622.4.1.1 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5 | 0.63 | 48.0 | 4.27e-01 | 78.8% | 71.1% |
| 5036274 | 6155.1.1.0 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter | 0.63 | 44.0 | 4.58e-01 | 81.2% | 77.5% |
| 5083776 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.62 | 45.0 | 4.34e-01 | 76.5% | 72.6% |
| 3177832 | 174.1.1.62 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › PF27705 | 0.61 | 54.0 | 4.40e-01 | 97.6% | 67.5% |
| 5072196 | 633.4.1.0 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor | 0.61 | 46.0 | 4.44e-01 | 100.0% | 70.0% |
| 3211434 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.60 | 55.0 | 4.50e-01 | 100.0% | 72.7% |
| 5046896 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.60 | 48.0 | 4.94e-01 | 100.0% | 90.0% |
| 3289135 | 148.1.3.315 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF5682 | 0.60 | 45.0 | 4.84e-01 | 100.0% | 90.7% |
| 4954845 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.59 | 43.0 | 4.10e-01 | 76.5% | 73.0% |
| 3329196 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.59 | 44.0 | 4.20e-01 | 78.8% | 70.0% |
| 5070893 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.59 | 45.0 | 4.24e-01 | 82.4% | 84.8% |
| 3645555 | 3817.1.1.1 ↗ | alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 | 0.58 | 41.0 | 3.70e-01 | 100.0% | 51.2% |
| 3276011 | 109.4.1.80 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RRN3 | 0.58 | 46.0 | 2.84e-01 | 85.9% | 27.0% |
| 5078878 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.58 | 53.0 | 4.24e-01 | 100.0% | 78.2% |
| 5049406 | 148.1.3.20 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_2 | 0.58 | 49.0 | 4.79e-01 | 98.8% | 82.1% |
| 3515526 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.58 | 51.0 | 4.36e-01 | 96.5% | 91.1% |
| 3585432 | 604.1.1.98 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Anc-1 | 0.58 | 42.0 | 3.79e-01 | 76.5% | 65.2% |
| 3388894 | 133.1.1.12 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › DH_ALS2 | 0.58 | 46.0 | 3.60e-01 | 87.1% | 89.2% |
| 3773479 | 633.21.1.23 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 | 0.58 | 52.0 | 4.52e-01 | 100.0% | 83.8% |
| 3785916 | 3559.1.1.40 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Bap31 | 0.57 | 44.0 | 3.99e-01 | 81.2% | 76.4% |
| 3664670 | 604.1.1.189 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Occludin_ELL | 0.56 | 40.0 | 3.41e-01 | 75.3% | 60.7% |
| 3568113 | 174.1.1.14 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › NKAIN | 0.56 | 49.0 | 4.34e-01 | 100.0% | 66.7% |
| 5064406 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.56 | 50.0 | 4.42e-01 | 97.6% | 70.8% |
| 4842303 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.55 | 51.0 | 3.76e-01 | 100.0% | 50.5% |
| 5023244 | 604.5.1.2 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU | 0.55 | 40.0 | 3.74e-01 | 78.8% | 66.4% |
| 5061623 | 7516.1.1.26 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_tranf_2_3 | 0.55 | 49.0 | 3.31e-01 | 100.0% | 57.2% |
| 5026526 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.54 | 49.0 | 4.65e-01 | 98.8% | 94.0% |
| 5008465 | 174.1.1.95 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF7144 | 0.54 | 47.0 | 4.02e-01 | 98.8% | 92.1% |
| 5081683 | 2002.3.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase › Glyco_hydro_57 | 0.53 | 49.0 | 3.06e-01 | 98.8% | 19.8% |
| 3411249 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.53 | 48.0 | 4.17e-01 | 100.0% | 69.2% |
| 3964011 | 633.21.1.1 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › DUF326 | 0.52 | 47.0 | 4.34e-01 | 100.0% | 76.4% |
| 3919997 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.52 | 44.0 | 3.95e-01 | 100.0% | 65.8% |
| 4003767 | 603.1.1.136 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HB_ELP1 | 0.52 | 38.0 | 3.14e-01 | 80.0% | 54.1% |
| 5054201 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.50 | 43.0 | 3.93e-01 | 91.8% | 71.8% |
D2
high
residues 93-138
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ng6A02 | 1.10.10.410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.77 | 64.0 | 6.10e-01 | 100.0% | 91.2% |
| 4mspB02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.76 | 58.0 | 4.92e-01 | 82.6% | 69.3% |
| 3a1yA00 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.72 | 60.0 | 5.68e-01 | 97.8% | 81.0% |
| 2lpnA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.70 | 58.0 | 4.61e-01 | 100.0% | 59.0% |
| 2qgyB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.70 | 59.0 | 4.30e-01 | 100.0% | 35.8% |
| 7p2yd01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.65 | 53.0 | 4.34e-01 | 100.0% | 92.9% |
| 3tzeA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.65 | 49.0 | 3.84e-01 | 87.0% | 74.1% |
| 1cqxA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.62 | 50.0 | 3.66e-01 | 100.0% | 78.0% |
| 1r3dA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.61 | 46.0 | 2.99e-01 | 91.3% | 58.4% |
| 1khvA04 | 6.10.140.320 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 42.0 | 4.02e-01 | 73.9% | 94.4% |
| 7xcnM01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.59 | 48.0 | 4.20e-01 | 100.0% | 60.3% |
| 5zorA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.59 | 49.0 | 4.31e-01 | 97.8% | 79.5% |
| 3hduA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 47.0 | 3.29e-01 | 91.3% | 32.9% |
| 1pu6A01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.56 | 44.0 | 3.59e-01 | 89.1% | 84.0% |
| 2lrdA00 | 1.10.10.1840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.56 | 39.0 | 3.75e-01 | 87.0% | 60.7% |
| 1serA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.56 | 38.0 | 3.76e-01 | 89.1% | 66.0% |
| 1ac1A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 43.0 | 2.95e-01 | 93.5% | 30.9% |
| 3dktA02 | 3.30.2320.10 | Alpha Beta › 2-Layer Sandwich › hypothetical protein PF0899 fold › hypothetical protein PF0899 domain | 0.53 | 43.0 | 3.55e-01 | 97.8% | 100.0% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 36.0 | 3.43e-01 | 95.7% | 60.0% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.50 | 40.0 | 2.65e-01 | 97.8% | 19.7% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028090 | 610.3.1.0 ↗ | alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain | 0.83 | 72.0 | 5.00e-01 | 97.8% | 33.1% |
| 4532731 | 101.1.17.1 ↗ | alpha arrays › HTH › HTH › FF domain › Ribosomal_S17e | 0.77 | 66.0 | 5.68e-01 | 100.0% | 65.3% |
| 3234424 | 108.1.1.96 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_1, EF-hand_6, EF-hand_7 | 0.77 | 55.0 | 4.63e-01 | 78.3% | 55.0% |
| 3946148 | 101.1.2.260 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2492 | 0.76 | 66.0 | 5.77e-01 | 100.0% | 84.3% |
| 3798418 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.75 | 54.0 | 4.55e-01 | 78.3% | 55.0% |
| 4026719 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 62.0 | 4.67e-01 | 100.0% | 44.8% |
| 4994576 | 101.35.1.36 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › PF27234 | 0.73 | 59.0 | 5.38e-01 | 100.0% | 76.8% |
| 5049282 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 61.0 | 5.13e-01 | 100.0% | 60.0% |
| 3193553 | 101.1.2.212 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cac1_C | 0.71 | 59.0 | 5.38e-01 | 100.0% | 78.5% |
| 3233004 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 59.0 | 5.84e-01 | 100.0% | 94.0% |
| 4949223 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 58.0 | 5.48e-01 | 100.0% | 100.0% |
| 4031678 | 101.1.2.20 ↗ | alpha arrays › HTH › HTH › winged helix domain › Arg_repressor | 0.69 | 60.0 | 5.36e-01 | 100.0% | 76.9% |
| 3258173 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 55.0 | 5.33e-01 | 100.0% | 90.9% |
| 4678981 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 55.0 | 5.45e-01 | 100.0% | 94.0% |
| 4142344 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 53.0 | 5.12e-01 | 97.8% | 92.7% |
| 3914757 | 592.1.1.7 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PF26091 | 0.66 | 57.0 | 5.00e-01 | 100.0% | 78.6% |
| 3716703 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.65 | 54.0 | 4.76e-01 | 100.0% | 73.3% |
| 3844868 | 6088.1.1.2 ↗ | alpha arrays › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › Helical bundle domain in elongation factor 3A › PF26051 | 0.64 | 53.0 | 4.67e-01 | 100.0% | 85.3% |
| 3577145 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.58 | 45.0 | 4.36e-01 | 100.0% | 80.0% |
| 3451648 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 47.0 | 3.96e-01 | 100.0% | 92.2% |
| 3195918 | 4336.2.1.1 ↗ | alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 | 0.56 | 38.0 | 3.07e-01 | 73.9% | 66.0% |
| 4014429 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.55 | 41.0 | 2.64e-01 | 97.8% | 13.9% |
| 5064861 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.54 | 43.0 | 2.85e-01 | 100.0% | 76.7% |
| 5059485 | 7076.1.1.0 ↗ | 0.54 | 36.0 | 3.43e-01 | 78.3% | 58.2% | |
| 5061318 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.52 | 37.0 | 3.30e-01 | 76.1% | 53.8% |
| 5061757 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.51 | 36.0 | 3.20e-01 | 76.1% | 50.0% |