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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00269

Bact-Vir

Filtrate_w_scaffold_3_prodigal-single.1__X__X__00269

Identity

Kingdom:
phage

Quality

78.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-54
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2aswA00 1.10.8.500 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase 0.71 47.0 4.61e-01 100.0% 62.5%
1d1rA00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.71 39.0 3.25e-01 80.4% 31.3%
3bbyA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.57 49.0 3.81e-01 100.0% 42.7%
5h9cA00 1.10.287.210 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.57 50.0 4.39e-01 100.0% 65.4%
6bz0D01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 47.0 3.13e-01 96.1% 23.5%
3kdrA03 3.30.1120.70 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.56 38.0 3.88e-01 82.4% 72.0%
4ofzA01 1.20.58.1800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 47.0 3.68e-01 100.0% 45.1%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3422887 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.72 67.0 4.99e-01 100.0% 60.9%
3389346 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.67 59.0 3.68e-01 100.0% 18.5%
1145753 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.62 55.0 4.85e-01 100.0% 73.3%
3397298 109.3.1.163 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.60 50.0 2.92e-01 94.1% 13.8%
3685191 4120.1.1.0 few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.59 52.0 3.86e-01 100.0% 38.5%
1116546 3765.1.1.1 alpha arrays › N-terminal domain in some Dicers › N-terminal domain in some Dicers › N-terminal domain in some Dicers › Dicers_N 0.52 45.0 3.74e-01 100.0% 65.2%