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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00312

Bact-Vir

Filtrate_w_scaffold_3_prodigal-single.1__X__X__00312

Identity

Kingdom:
phage

Quality

66.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-60
PDB
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.86 74.0 6.99e-01 94.5% 81.8%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.85 74.0 6.86e-01 96.4% 79.4%
3mlfE00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 72.0 6.10e-01 92.7% 59.3%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 73.0 6.96e-01 94.5% 84.1%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 74.0 6.63e-01 98.2% 72.7%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 69.0 5.88e-01 96.4% 57.0%
1x57A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 72.0 6.01e-01 94.5% 60.4%
2kpjA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.84 72.0 6.67e-01 96.4% 78.6%
1y7yA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 72.0 6.70e-01 96.4% 82.6%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 68.0 7.01e-01 90.9% 100.0%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 69.0 5.63e-01 94.5% 53.4%
2xi8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 71.0 6.71e-01 96.4% 80.3%
3u3wA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 70.0 6.47e-01 94.5% 76.8%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 71.0 6.42e-01 98.2% 77.3%
2xcjA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 69.0 5.99e-01 94.5% 65.5%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.82 69.0 6.07e-01 94.5% 66.7%
2bnmA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 72.0 6.49e-01 98.2% 79.7%
2ef8A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 69.0 6.01e-01 96.4% 66.7%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 69.0 5.83e-01 96.4% 69.9%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 67.0 6.01e-01 94.5% 68.4%
3kxaA02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 64.0 6.10e-01 89.1% 78.8%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 67.0 5.71e-01 94.5% 58.2%
4ghjB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 68.0 6.17e-01 96.4% 72.4%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 69.0 6.21e-01 98.2% 75.3%
2ox6D00 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.80 67.0 4.83e-01 96.4% 33.5%
3f51C00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 69.0 5.87e-01 98.2% 64.4%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 66.0 6.28e-01 94.5% 83.3%
3fmyA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 69.0 6.56e-01 100.0% 84.8%
1y9qA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 67.0 5.82e-01 96.4% 68.2%
2mezA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 67.0 5.54e-01 98.2% 54.9%
1lliA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.79 67.0 5.79e-01 98.2% 67.4%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 67.0 6.21e-01 98.2% 78.6%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 65.0 5.99e-01 96.4% 79.2%
1rzsA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 58.0 5.70e-01 94.5% 75.4%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 63.0 6.22e-01 94.5% 88.3%
7ezyA01 1.10.3100.10 Mainly Alpha › Orthogonal Bundle › Putative cytoplasmic protein › Putative cytoplasmic protein 0.76 64.0 5.06e-01 94.5% 45.2%
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 64.0 5.78e-01 96.4% 77.6%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 63.0 5.59e-01 96.4% 69.5%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 63.0 5.81e-01 96.4% 89.0%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 61.0 5.42e-01 94.5% 73.2%
4pu7A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 62.0 5.76e-01 96.4% 77.5%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 61.0 5.89e-01 96.4% 90.5%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 61.0 5.83e-01 98.2% 93.8%
3g7dA04 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 61.0 5.17e-01 94.5% 61.5%
1x2lA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 59.0 5.27e-01 100.0% 78.8%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 56.0 5.08e-01 94.5% 65.8%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 47.0 3.93e-01 74.5% 51.5%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 3.60e-01 72.7% 37.1%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.29e-01 74.5% 82.5%
1pjrA02 1.10.10.160 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.55 39.0 3.66e-01 78.2% 97.2%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.29e-01 74.5% 52.3%
2ymmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 40.0 3.72e-01 83.6% 90.4%
1ij5A03 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 41.0 3.29e-01 98.2% 45.0%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5057414 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.92 79.0 7.24e-01 92.7% 72.9%
5057753 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.91 84.0 7.13e-01 100.0% 67.1%
4945219 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.91 80.0 7.74e-01 94.5% 88.3%
4947991 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.90 82.0 7.29e-01 100.0% 74.7%
5061120 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 81.0 6.80e-01 100.0% 62.2%
5027582 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 81.0 7.10e-01 100.0% 70.0%
4484890 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.89 81.0 6.80e-01 100.0% 61.1%
5046258 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 80.0 7.17e-01 100.0% 76.0%
4978931 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.88 78.0 7.13e-01 96.4% 81.4%
3988959 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 75.0 7.09e-01 92.7% 81.5%
4316705 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 80.0 6.98e-01 100.0% 70.0%
4589522 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 79.0 6.80e-01 100.0% 65.9%
3956747 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 79.0 7.52e-01 100.0% 89.2%
5037143 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 79.0 6.94e-01 100.0% 71.2%
5050179 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 79.0 7.71e-01 100.0% 95.0%
4568698 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 76.0 7.36e-01 94.5% 90.0%
4425759 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.88 76.0 5.93e-01 94.5% 49.1%
3286370 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 74.0 5.58e-01 92.7% 41.6%
4173793 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 77.0 6.80e-01 98.2% 68.8%
3958819 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.87 74.0 7.20e-01 92.7% 86.7%
4942426 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 78.0 7.41e-01 100.0% 86.2%
5031045 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 76.0 6.82e-01 96.4% 73.3%
3988207 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 74.0 6.69e-01 92.7% 71.2%
3589299 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 75.0 6.06e-01 94.5% 54.0%
3953562 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.87 76.0 6.97e-01 96.4% 80.0%
4990185 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.87 78.0 6.99e-01 100.0% 74.7%
137778 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 75.0 6.97e-01 94.5% 80.6%
5030212 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 76.0 7.05e-01 98.2% 84.3%
4950501 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.86 77.0 7.30e-01 98.2% 89.2%
4032323 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 76.0 7.16e-01 96.4% 84.6%
4071576 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 76.0 6.59e-01 100.0% 67.1%
5048537 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.86 70.0 7.30e-01 89.1% 100.0%
4975718 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.86 76.0 6.84e-01 98.2% 76.0%
3588760 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 74.0 5.95e-01 96.4% 52.4%
5059226 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 76.0 6.63e-01 98.2% 72.5%
4967965 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 74.0 6.82e-01 96.4% 77.1%
5000483 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 74.0 6.38e-01 96.4% 64.7%
4984923 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 74.0 6.50e-01 96.4% 68.8%
4982971 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 75.0 6.58e-01 98.2% 70.0%
4956880 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 77.0 7.05e-01 100.0% 84.3%
3591049 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 74.0 5.31e-01 96.4% 37.3%
3587893 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 72.0 5.89e-01 94.5% 53.0%
3965656 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.85 73.0 6.40e-01 94.5% 66.3%
5057975 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 73.0 6.59e-01 96.4% 73.3%
5028787 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.84 74.0 6.71e-01 100.0% 80.0%
2766 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 73.0 6.96e-01 94.5% 84.1%
4969117 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 74.0 6.04e-01 98.2% 58.0%
4055749 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 72.0 6.08e-01 94.5% 58.9%
3280923 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.84 73.0 6.29e-01 96.4% 65.9%
3336283 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 76.0 7.40e-01 100.0% 98.3%
3947329 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 71.0 6.74e-01 94.5% 81.5%
3220337 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.84 76.0 6.36e-01 100.0% 83.3%
3624238 101.1.4.43 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3+MBF1 0.83 76.0 5.78e-01 100.0% 62.5%
4869547 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 73.0 6.86e-01 98.2% 89.6%
3951505 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 74.0 6.68e-01 100.0% 77.3%
5036222 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.83 73.0 6.89e-01 98.2% 87.7%
3969553 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.83 71.0 6.45e-01 96.4% 76.0%
3587762 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 71.0 6.10e-01 96.4% 63.6%
5015314 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.83 72.0 6.39e-01 98.2% 72.5%
2157747 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.83 72.0 6.73e-01 96.4% 86.6%
3972208 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 71.0 6.41e-01 96.4% 74.7%
3970029 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.82 70.0 6.20e-01 94.5% 67.5%
4536849 10.12.1.146 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › HTH_3 0.82 71.0 4.20e-01 96.4% 13.9%
None 0.82 68.0 6.68e-01 92.7% 88.3%
3589516 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.82 70.0 6.46e-01 94.5% 77.1%
4818340 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.82 73.0 7.04e-01 100.0% 93.7%
373382 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 71.0 6.39e-01 98.2% 76.3%
4393390 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.82 68.0 5.74e-01 94.5% 55.8%
3288847 101.1.4.18 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_31 0.82 69.0 6.22e-01 94.5% 73.3%
5015485 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.81 70.0 6.64e-01 96.4% 89.2%
3011019 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.81 72.0 7.15e-01 100.0% 100.0%
None 0.81 69.0 6.61e-01 96.4% 86.2%
2057229 101.1.4.23 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MqsA_antitoxin 0.81 70.0 6.51e-01 98.2% 79.7%
3980119 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 69.0 6.42e-01 96.4% 80.0%
3062945 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 69.0 6.37e-01 96.4% 78.9%
4971248 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.81 70.0 6.52e-01 98.2% 85.7%
4043777 101.1.4.16 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_25 0.80 68.0 5.76e-01 94.5% 66.7%
None 0.80 69.0 6.38e-01 96.4% 78.6%
3285035 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 70.0 5.95e-01 98.2% 64.4%
1149503 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 68.0 6.16e-01 96.4% 72.4%
3587532 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.80 65.0 6.55e-01 90.9% 98.2%
2581392 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 67.0 6.17e-01 94.5% 77.5%
4155920 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 70.0 6.31e-01 98.2% 77.3%
4300595 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.80 66.0 5.57e-01 94.5% 55.8%
3982350 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 64.0 5.97e-01 90.9% 71.4%
380799 101.1.4.23 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MqsA_antitoxin 0.79 69.0 6.56e-01 100.0% 84.8%
3602378 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.79 69.0 6.53e-01 98.2% 89.2%
3958941 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.79 65.0 5.80e-01 94.5% 66.3%
3589590 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 65.0 6.34e-01 94.5% 90.0%
3967547 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 66.0 6.19e-01 98.2% 78.6%
4392992 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.78 65.0 5.84e-01 96.4% 70.0%
5007716 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.77 63.0 5.88e-01 94.5% 75.7%
3953342 101.1.4.61 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF27182 0.76 64.0 4.82e-01 94.5% 40.0%
3588628 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.75 61.0 6.09e-01 94.5% 96.6%
3964678 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 59.0 5.59e-01 89.1% 83.1%
3605903 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 61.0 5.34e-01 96.4% 63.5%
1563574 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.73 61.0 5.83e-01 98.2% 93.8%
3699551 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 59.0 5.34e-01 96.4% 67.5%
3306298 101.1.4.53 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › PF29035 0.72 59.0 5.80e-01 96.4% 91.7%
D2 high residues 87-147
PDB
D3 medium residues 197-249
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f42A00 3.30.1310.10 Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain 0.81 58.0 4.73e-01 94.3% 43.0%
2kgfA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.79 55.0 3.99e-01 73.6% 66.4%
5c9iD01 1.10.439.10 Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 0.75 51.0 3.57e-01 75.5% 23.6%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 4.62e-01 90.6% 81.0%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.24e-01 84.9% 81.6%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.44e-01 90.6% 85.4%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.39e-01 90.6% 83.0%
1f02T00 4.10.820.10 Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain 0.64 43.0 4.00e-01 98.1% 56.1%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 55.0 4.23e-01 98.1% 67.5%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.60 45.0 4.07e-01 79.2% 62.0%
6mvtA03 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.59 46.0 2.95e-01 84.9% 47.5%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.59 39.0 2.88e-01 86.8% 23.7%
3rosA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.58 50.0 3.15e-01 98.1% 18.7%
1z6nA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 39.0 2.72e-01 73.6% 22.3%
3v4rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 50.0 3.24e-01 100.0% 63.4%
3wnzA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.56 42.0 3.05e-01 81.1% 45.8%
3oqgA00 3.40.1440.50 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › 0.55 40.0 2.76e-01 77.4% 58.5%
1pc6A00 1.10.3790.10 Mainly Alpha › Orthogonal Bundle › NinB fold › NinB 0.54 40.0 2.86e-01 77.4% 29.8%
2f9wA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 35.0 2.65e-01 71.7% 27.5%
3cjxA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 37.0 2.74e-01 75.5% 59.3%
6denA03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.52 38.0 2.54e-01 81.1% 99.1%
3qw4B02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 36.0 2.52e-01 77.4% 25.5%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3702049 2485.1.1.12 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SCO1-SenC 0.77 58.0 4.09e-01 79.2% 50.7%
5014656 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.76 49.0 4.59e-01 83.0% 53.8%
4928248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 57.0 4.30e-01 88.7% 66.2%
3799812 2485.1.1.71 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › SelP_N 0.70 35.0 2.72e-01 73.6% 22.9%
3547409 604.1.1.153 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF4455 0.70 61.0 4.00e-01 94.3% 85.5%
4026519 3871.1.1.1 alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.70 63.0 4.59e-01 100.0% 87.4%
154263 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.67 55.0 4.44e-01 90.6% 85.4%
5058268 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.67 50.0 3.83e-01 79.2% 74.8%
4981966 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 53.0 3.60e-01 88.7% 23.5%
4023956 3871.1.1.1 alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN 0.66 51.0 3.95e-01 100.0% 36.2%
3798928 59.1.4.2 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › DUF3591 0.64 51.0 3.02e-01 94.3% 10.3%
3781411 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.64 51.0 3.32e-01 88.7% 20.0%
3523591 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.64 45.0 3.73e-01 75.5% 41.0%
3565062 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.62 58.0 4.08e-01 98.1% 99.3%
4253201 109.3.1.136 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF2254 0.60 46.0 3.17e-01 84.9% 73.2%
3958223 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 43.0 3.62e-01 79.2% 76.8%
4046039 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.59 41.0 3.48e-01 73.6% 94.1%
3962443 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.55 41.0 2.88e-01 98.1% 25.6%
3578504 7564.1.1.1 a/b three-layered sandwiches › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Homo-oligomeric flavin-containing Cys decarboxylases, HFCD › Flavoprotein 0.54 44.0 3.05e-01 90.6% 35.6%
3276546 314.1.1.9 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His 0.54 43.0 2.61e-01 86.8% 14.0%
5068734 244.4.1.2 a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases 0.53 45.0 3.32e-01 94.3% 59.3%
3465836 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 36.0 2.95e-01 77.4% 52.0%