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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00320

Bact-Vir

Filtrate_w_scaffold_3_prodigal-single.1__X__X__00320

Identity

Kingdom:
phage

Quality

83.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 107-117_165-272
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.55 42.0 3.80e-01 79.0% 69.4%
2f2cA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 28.0 3.02e-01 91.6% 55.7%
3f7cA00 1.20.1590.10 Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like 0.53 41.0 3.53e-01 95.8% 49.7%
3if8B02 1.20.58.730 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 31.0 3.34e-01 93.3% 69.0%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.52 40.0 3.59e-01 82.4% 85.2%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3884902 5001.1.1.10 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Ceramidase 0.65 51.0 3.98e-01 83.2% 83.8%
3544039 11.2.1.19 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF3657 0.57 45.0 3.37e-01 86.6% 79.1%
4948245 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.55 42.0 4.31e-01 91.6% 88.2%
4248743 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.54 24.0 3.06e-01 99.2% 70.0%
5044957 632.22.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.53 29.0 3.69e-01 88.2% 91.4%
D2 high residues 282-322
PDB
Domain cluster: representative
D3 medium residues 1-65
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.53 43.0 3.77e-01 95.4% 97.2%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4968762 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.55 46.0 3.95e-01 100.0% 94.8%