←Back to structures
Filtrate_w_scaffold_3_prodigal-single.1__X__X__00336
Bact-VirFiltrate_w_scaffold_3_prodigal-single.1__X__X__00336
Identity
- Kingdom:
- phage
Quality
89.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-92
Domain cluster:
rep: SRR1747065_scaffold_28_prodigal-single.1__X__X__00193__DFULL
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qb7B02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.67 | 46.0 | 4.02e-01 | 70.7% | 51.4% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.61 | 45.0 | 3.60e-01 | 79.3% | 51.3% |
| 1qmoE01 | 2.60.40.4220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 30.0 | 3.14e-01 | 71.7% | 51.2% |
| 4g59C01 | 2.60.40.2920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 42.0 | 4.11e-01 | 73.9% | 87.4% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 41.0 | 4.14e-01 | 73.9% | 100.0% |
| 8dy9I01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.58 | 43.0 | 3.39e-01 | 79.3% | 57.8% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.58 | 31.0 | 3.01e-01 | 72.8% | 47.1% |
| 2a1vA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.57 | 42.0 | 3.70e-01 | 78.3% | 69.6% |
| 2kmwA01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 39.0 | 3.72e-01 | 71.7% | 87.5% |
| 2plwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 37.0 | 3.00e-01 | 70.7% | 41.2% |
| 7qssA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 38.0 | 3.08e-01 | 73.9% | 67.6% |
| 2cw8A03 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 39.0 | 3.29e-01 | 78.3% | 74.6% |
| 2ab5A02 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 36.0 | 3.28e-01 | 77.2% | 74.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4244689 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.71 | 49.0 | 3.52e-01 | 71.7% | 62.7% |
| 4591904 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.69 | 48.0 | 3.55e-01 | 71.7% | 71.1% |
| 1155793 | 5104.1.1.3 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA2 | 0.68 | 46.0 | 4.00e-01 | 70.7% | 50.0% |
| 5000791 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.67 | 46.0 | 4.18e-01 | 70.7% | 56.7% |
| 3988437 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.66 | 46.0 | 3.59e-01 | 70.7% | 60.0% |
| 3172184 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.62 | 44.0 | 3.89e-01 | 73.9% | 57.0% |
| 3718957 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.62 | 42.0 | 3.90e-01 | 70.7% | 60.8% |
| 4029432 | 871.1.1.1 ↗ | a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 | 0.60 | 41.0 | 3.11e-01 | 70.7% | 96.7% |
| 4937054 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.60 | 42.0 | 4.03e-01 | 71.7% | 91.4% |
| 4938255 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.57 | 38.0 | 4.06e-01 | 70.7% | 81.2% |
| 1875302 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 41.0 | 3.29e-01 | 79.3% | 83.0% |
| 4638926 | 2003.1.5.68 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS_N | 0.54 | 38.0 | 3.24e-01 | 72.8% | 86.5% |
| 3950413 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.54 | 37.0 | 3.58e-01 | 72.8% | 85.5% |
| 5057455 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.52 | 42.0 | 4.44e-01 | 88.0% | 98.8% |
| 3740807 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.51 | 35.0 | 3.60e-01 | 70.7% | 88.2% |
| 4346169 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.50 | 36.0 | 2.82e-01 | 75.0% | 91.2% |