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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00345
Bact-VirFiltrate_w_scaffold_3_prodigal-single.1__X__X__00345
Identity
- Kingdom:
- phage
Quality
69.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-75_117-159
D2
medium
residues 198-219_280-294_405-428_446-477
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.67 | 35.0 | 3.41e-01 | 93.5% | 45.7% |
| 4s3mB02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.58 | 36.0 | 3.48e-01 | 98.9% | 54.7% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.58 | 37.0 | 3.98e-01 | 98.9% | 75.9% |
| 3t4rA00 | 1.20.120.1590 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 36.0 | 4.03e-01 | 71.0% | 83.3% |
| 2efeA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.56 | 39.0 | 4.20e-01 | 95.7% | 84.0% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 39.0 | 3.54e-01 | 75.3% | 100.0% |
| 3ecsC01 | 1.20.120.1070 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Translation initiation factor eIF-2B, N-terminal domain | 0.54 | 34.0 | 3.40e-01 | 96.8% | 59.0% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.52 | 38.0 | 3.59e-01 | 76.3% | 99.1% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.52 | 43.0 | 3.78e-01 | 92.5% | 63.6% |
| 4uw9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 39.0 | 4.09e-01 | 93.5% | 91.6% |
| 8carA01 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.50 | 39.0 | 2.63e-01 | 84.9% | 25.1% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995712 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.63 | 48.0 | 4.82e-01 | 81.7% | 88.4% |
| 3574388 | 103.9.1.0 ↗ | alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain | 0.62 | 42.0 | 4.27e-01 | 74.2% | 71.1% |
| 3489683 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.62 | 39.0 | 4.28e-01 | 94.6% | 78.7% |
| 3525680 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.61 | 41.0 | 4.54e-01 | 96.8% | 86.7% |
| 5048577 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.59 | 41.0 | 4.43e-01 | 93.5% | 83.7% |
| 3888089 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.59 | 41.0 | 3.92e-01 | 95.7% | 61.8% |
| 3925681 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.59 | 41.0 | 4.23e-01 | 95.7% | 75.6% |
| 3349480 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.58 | 41.0 | 4.20e-01 | 73.1% | 82.2% |
| 3735237 | 601.19.1.18 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Mmc1_C | 0.58 | 40.0 | 3.39e-01 | 71.0% | 63.3% |
| 4028482 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.57 | 41.0 | 3.59e-01 | 74.2% | 74.3% |
| 3500715 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.57 | 41.0 | 4.44e-01 | 95.7% | 87.5% |
| 3295115 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.56 | 39.0 | 4.01e-01 | 96.8% | 74.4% |
| 3229748 | 1134.1.1.9 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › RSLD_CPSF6 | 0.56 | 34.0 | 3.60e-01 | 100.0% | 67.1% |
| 4646569 | 4994.1.1.1 ↗ | alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 | 0.56 | 37.0 | 3.76e-01 | 100.0% | 67.4% |
| 4247950 | 4994.1.1.1 ↗ | alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 | 0.55 | 37.0 | 3.73e-01 | 97.8% | 67.4% |
| 1149078 | 531.1.1.1 ↗ | alpha arrays › Domains of FliG › C-terminal domain of FliG › C-terminal domain of FliG › FliG_C | 0.55 | 39.0 | 3.42e-01 | 72.0% | 92.5% |
| 3622208 | 633.24.1.2 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 | 0.55 | 38.0 | 3.72e-01 | 87.1% | 64.8% |
| 4984588 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.53 | 46.0 | 3.59e-01 | 98.9% | 71.2% |
| 4119921 | 1128.1.1.23 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Ycf66_N | 0.53 | 34.0 | 3.45e-01 | 97.8% | 66.0% |
| 4577302 | 314.1.1.5 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2e | 0.52 | 43.0 | 3.07e-01 | 93.5% | 84.3% |
| 5055626 | 1076.1.1.0 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related | 0.51 | 36.0 | 3.16e-01 | 74.2% | 94.0% |
| 4962833 | 603.7.1.0 ↗ | alpha bundles › STAT-like › Ammonia monooxygenase subunit C › Ammonia monooxygenase subunit C | 0.51 | 39.0 | 3.14e-01 | 81.7% | 94.4% |
| 4969464 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.51 | 32.0 | 3.34e-01 | 92.5% | 67.8% |
| 3322862 | 314.1.1.5 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2e | 0.50 | 44.0 | 3.15e-01 | 98.9% | 65.2% |
D3
medium
residues 220-279_429-445
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 31.0 | 3.24e-01 | 92.2% | 52.9% |
| 1w7cA03 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 40.0 | 3.44e-01 | 70.1% | 73.0% |
| 1n91A00 | 3.30.1200.10 | Alpha Beta › 2-Layer Sandwich › Conserved Hypothetical Protein Mth637; Chain: A; › YggU-like | 0.57 | 40.0 | 3.62e-01 | 100.0% | 52.8% |
| 3gkuA01 | 3.30.30.80 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › probable RNA-binding protein from clostridium symbiosum atcc 14940 | 0.56 | 35.0 | 4.15e-01 | 84.4% | 94.3% |
| 3x1oA00 | 1.20.120.1790 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.52 | 41.0 | 3.38e-01 | 89.6% | 95.3% |
D4
medium
residues 295-404