Back to structures

Filtrate_w_scaffold_3_prodigal-single.1__X__X__00377

Bact-Vir

Filtrate_w_scaffold_3_prodigal-single.1__X__X__00377

Identity

Kingdom:
phage

Quality

76.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-47
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yo2A02 6.10.250.2030 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.74 64.0 5.56e-01 100.0% 63.3%
6zhhA01 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.65 47.0 3.03e-01 77.5% 19.4%
8evkA01 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.60 47.0 3.40e-01 85.0% 63.9%
6k8nA01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 37.0 2.58e-01 70.0% 25.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3167617 4029.1.1.1 a+b duplicates or obligate multimers › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like › SSH domain in siroheme synthase middle domains-like › Sirohm_synth_M 0.79 51.0 5.11e-01 85.0% 65.0%
3538408 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.71 61.0 4.66e-01 100.0% 43.2%