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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00383
Bact-VirFiltrate_w_scaffold_3_prodigal-single.1__X__X__00383
Identity
- Kingdom:
- phage
Quality
80.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-92
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.68 | 48.0 | 3.90e-01 | 74.4% | 39.9% |
| 2cztA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 55.0 | 4.65e-01 | 92.2% | 83.2% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 39.0 | 3.69e-01 | 78.9% | 51.9% |
| 2ec1A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 46.0 | 4.27e-01 | 77.8% | 80.5% |
| 3n7cA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 44.0 | 4.23e-01 | 77.8% | 79.6% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 39.0 | 4.25e-01 | 75.6% | 80.6% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 37.0 | 4.24e-01 | 82.2% | 87.1% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 33.0 | 3.92e-01 | 72.2% | 79.7% |
| 2o62A02 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 43.0 | 3.74e-01 | 74.4% | 89.1% |
| 2opiA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.60 | 52.0 | 3.97e-01 | 94.4% | 87.1% |
| 2d9wA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 42.0 | 3.97e-01 | 74.4% | 81.8% |
| 1gt7A00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.59 | 52.0 | 3.65e-01 | 94.4% | 83.2% |
| 3c4bA02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 35.0 | 4.04e-01 | 87.8% | 80.6% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 36.0 | 4.19e-01 | 75.6% | 88.7% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.59 | 37.0 | 4.30e-01 | 75.6% | 92.1% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 37.0 | 4.33e-01 | 74.4% | 95.0% |
| 1dzuP00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.58 | 52.0 | 3.99e-01 | 100.0% | 89.0% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 36.0 | 4.12e-01 | 80.0% | 93.5% |
| 4kh8A01 | 2.40.128.540 | Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 | 0.56 | 43.0 | 3.53e-01 | 81.1% | 72.9% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 32.0 | 3.21e-01 | 75.6% | 53.8% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 34.0 | 3.49e-01 | 75.6% | 65.1% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 34.0 | 3.59e-01 | 75.6% | 71.4% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 33.0 | 3.81e-01 | 71.1% | 88.5% |
| 1bqnA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 41.0 | 4.05e-01 | 96.7% | 76.6% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 42.0 | 3.56e-01 | 82.2% | 57.0% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 35.0 | 3.85e-01 | 81.1% | 84.5% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 35.0 | 3.90e-01 | 93.3% | 87.1% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 44.0 | 4.19e-01 | 92.2% | 90.4% |
| 3h41A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 37.0 | 4.17e-01 | 77.8% | 100.0% |
| 3wnkA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 29.0 | 2.69e-01 | 72.2% | 37.6% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 39.0 | 3.28e-01 | 82.2% | 90.1% |
| 2ls0101 | 2.40.50.670 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Target recognition domain of lytic exoenzyme | 0.51 | 38.0 | 3.57e-01 | 80.0% | 96.5% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 30.0 | 2.74e-01 | 74.4% | 39.7% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 34.0 | 3.74e-01 | 81.1% | 84.7% |
| 2bwnB01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 38.0 | 3.21e-01 | 81.1% | 74.8% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.51 | 31.0 | 3.76e-01 | 77.8% | 96.6% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3704395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 41.0 | 4.72e-01 | 74.4% | 85.9% |
| 4117297 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 40.0 | 4.45e-01 | 74.4% | 75.7% |
| 3646319 | 6.1.1.25 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF569 | 0.66 | 48.0 | 3.90e-01 | 76.7% | 83.4% |
| 3478983 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 47.0 | 4.56e-01 | 75.6% | 76.2% |
| 3942573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 37.0 | 4.46e-01 | 74.4% | 86.2% |
| 3687350 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 36.0 | 4.45e-01 | 77.8% | 90.9% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.63 | 41.0 | 4.44e-01 | 87.8% | 78.7% |
| 5075465 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.63 | 36.0 | 4.37e-01 | 84.4% | 86.7% |
| 3213122 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.63 | 36.0 | 3.46e-01 | 73.3% | 47.6% |
| 3315951 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.62 | 44.0 | 4.66e-01 | 74.4% | 88.6% |
| 4086880 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.62 | 44.0 | 3.76e-01 | 74.4% | 89.3% |
| 3493294 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 45.0 | 3.87e-01 | 77.8% | 55.9% |
| 3295837 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.61 | 44.0 | 3.42e-01 | 74.4% | 87.6% |
| 3222570 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 45.0 | 4.17e-01 | 77.8% | 76.5% |
| 3378540 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.61 | 44.0 | 3.41e-01 | 74.4% | 88.6% |
| 3742938 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.60 | 35.0 | 4.03e-01 | 73.3% | 80.0% |
| 852 | 9.1.1.29 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BFA1_C | 0.60 | 43.0 | 3.74e-01 | 74.4% | 89.1% |
| 3564972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 37.0 | 4.12e-01 | 80.0% | 80.0% |
| 4929797 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.59 | 32.0 | 3.85e-01 | 71.1% | 79.7% |
| 3436557 | 220.4.1.8 ↗ | beta barrels › PH domain-like › second barrel domain in viral glycoproteins › second barrel domain in viral glycoproteins › ZGRF1-like_N | 0.59 | 41.0 | 4.40e-01 | 74.4% | 96.0% |
| 4931822 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 36.0 | 4.09e-01 | 77.8% | 84.6% |
| 4343392 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 42.0 | 4.02e-01 | 77.8% | 81.8% |
| 3213725 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.58 | 38.0 | 2.73e-01 | 78.9% | 22.3% |
| 3224710 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.58 | 39.0 | 4.24e-01 | 74.4% | 84.0% |
| 3880508 | 4.1.1.129 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_5 | 0.57 | 34.0 | 3.42e-01 | 75.6% | 55.8% |
| 3492026 | 4.1.1.129 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_5 | 0.56 | 34.0 | 3.30e-01 | 75.6% | 51.4% |
| 4071824 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.55 | 34.0 | 3.67e-01 | 75.6% | 73.3% |
| 3789210 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.54 | 37.0 | 2.51e-01 | 70.0% | 44.7% |
| 3939443 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.54 | 39.0 | 3.65e-01 | 93.3% | 60.9% |
| 4494894 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.53 | 36.0 | 3.45e-01 | 82.2% | 59.6% |
| 4456732 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 35.0 | 3.69e-01 | 82.2% | 75.0% |
| 3280641 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.53 | 36.0 | 3.49e-01 | 76.7% | 62.0% |
| 4119875 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 36.0 | 4.04e-01 | 82.2% | 95.4% |
| 3283097 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.53 | 36.0 | 3.40e-01 | 75.6% | 57.3% |
| 4929323 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 37.0 | 3.58e-01 | 77.8% | 83.6% |
| 4435672 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 34.0 | 3.81e-01 | 80.0% | 92.3% |
| 4183857 | 325.1.7.30 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Peptidase_M23 | 0.52 | 33.0 | 3.59e-01 | 82.2% | 78.7% |
| 3165403 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.51 | 33.0 | 3.74e-01 | 84.4% | 90.8% |
| 4127839 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 33.0 | 3.58e-01 | 83.3% | 80.0% |
| 1411292 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.51 | 35.0 | 3.23e-01 | 73.3% | 100.0% |
| 4625348 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.50 | 32.0 | 3.81e-01 | 82.2% | 96.7% |
| 4107506 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.50 | 33.0 | 3.80e-01 | 86.7% | 93.8% |
| 4597437 | 601.23.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_IV, MutS_III | 0.50 | 37.0 | 2.51e-01 | 100.0% | 21.9% |