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Filtrate_w_scaffold_3_prodigal-single.1__X__X__00386

Bact-Vir

Filtrate_w_scaffold_3_prodigal-single.1__X__X__00386

Identity

Kingdom:
phage

Quality

72.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-129
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1c8zA00 3.20.90.10 Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A 0.58 50.0 3.94e-01 93.0% 72.8%
4tpsA00 3.30.310.250 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA 0.56 32.0 3.10e-01 74.2% 49.3%
3ke6B01 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.55 45.0 3.79e-01 88.3% 91.0%
4r8oA00 2.40.128.720 Mainly Beta › Beta Barrel › Lipocalin › 0.52 36.0 4.06e-01 78.9% 93.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4999340 241.11.1.6 a+b two layers › Type III secretory system chaperone-like › YjbR-like › YjbR-like › TfoX_N 0.63 29.0 3.26e-01 93.0% 53.0%
4585662 7026.1.1.2 beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › MDM31_MDM32 0.53 38.0 3.13e-01 75.0% 48.9%
3734383 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.52 39.0 2.83e-01 79.7% 45.3%
4094888 12.3.1.41 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Raffinose_syn 0.51 35.0 3.11e-01 71.1% 59.5%
4667154 4252.1.1.0 beta barrels › AttH-like › AttH-like › AttH-like 0.51 37.0 3.15e-01 75.0% 50.2%
D2 high residues 158-214
PDB