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Filtrate_w_scaffold_4_prodigal-single.1__X__X__00025
Bact-VirFiltrate_w_scaffold_4_prodigal-single.1__X__X__00025
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-82_185-239
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.57 | 29.0 | 3.38e-01 | 91.9% | 68.1% |
| 2pejA00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.55 | 34.0 | 3.77e-01 | 73.5% | 76.1% |
| 1cf7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 26.0 | 3.27e-01 | 91.2% | 76.8% |
| 2yv9B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 35.0 | 3.52e-01 | 99.3% | 68.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3489209 | 101.1.10.33 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C | 0.61 | 28.0 | 3.18e-01 | 95.6% | 55.2% |
| 3979101 | 186.1.1.8 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_M | 0.54 | 39.0 | 4.18e-01 | 94.1% | 85.0% |
| 3546350 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.52 | 39.0 | 4.11e-01 | 94.1% | 88.0% |
| 4031566 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.52 | 37.0 | 3.88e-01 | 94.1% | 82.5% |
D2
high
residues 126-178
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g7cA02 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.57 | 39.0 | 3.32e-01 | 71.7% | 100.0% |
| 4amcA01 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.51 | 34.0 | 3.62e-01 | 71.7% | 87.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.58 | 39.0 | 2.44e-01 | 71.7% | 93.1% | |
| 3744244 | 209.1.2.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase | 0.56 | 39.0 | 2.43e-01 | 71.7% | 38.7% |
| 3780338 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 46.0 | 2.75e-01 | 98.1% | 91.9% |
| 4453958 | 274.1.1.23 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF5374 | 0.53 | 40.0 | 3.86e-01 | 84.9% | 73.3% |
| 4996383 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 39.0 | 3.01e-01 | 84.9% | 89.6% |
| 4929483 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.52 | 44.0 | 3.44e-01 | 98.1% | 70.0% |
| 4871690 | 209.1.2.1 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like › FGE-sulfatase | 0.51 | 42.0 | 2.75e-01 | 100.0% | 63.8% |
| 4214410 | 73.1.1.0 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain | 0.50 | 39.0 | 3.53e-01 | 86.8% | 80.0% |
| 3742622 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 36.0 | 2.77e-01 | 79.2% | 73.8% |
| 3251755 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.50 | 36.0 | 2.66e-01 | 79.2% | 64.8% |
| 4419527 | 2002.1.1.83 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 | 0.50 | 37.0 | 2.27e-01 | 79.2% | 18.2% |