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Filtrate_w_scaffold_4_prodigal-single.1__X__X__00104
Bact-VirFiltrate_w_scaffold_4_prodigal-single.1__X__X__00104
Identity
- Kingdom:
- phage
Quality
62.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 433-580_683-720
D2
high
residues 583-677
Domain cluster:
rep: KY499642.1__AQT28166.1__pVa21_225__00225__D302-421
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t6aA02 | 3.30.310.120 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein | 0.70 | 35.0 | 3.81e-01 | 75.8% | 56.4% |
| 4r03A00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 40.0 | 3.81e-01 | 77.9% | 56.0% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 33.0 | 3.54e-01 | 81.1% | 60.2% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.57 | 34.0 | 3.72e-01 | 83.2% | 71.2% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 29.0 | 3.27e-01 | 73.7% | 60.8% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 34.0 | 3.40e-01 | 100.0% | 57.0% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.56 | 27.0 | 3.08e-01 | 73.7% | 57.7% |
| 4c92C00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 36.0 | 3.87e-01 | 95.8% | 81.0% |
| 8evkA01 | 3.30.1130.10 | Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain | 0.51 | 36.0 | 3.48e-01 | 73.7% | 100.0% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.51 | 45.0 | 3.93e-01 | 100.0% | 91.8% |
| 2g5dA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.50 | 40.0 | 3.19e-01 | 87.4% | 92.5% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3590950 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.67 | 34.0 | 2.85e-01 | 73.7% | 28.4% |
| 4149820 | 331.3.1.2 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A | 0.58 | 51.0 | 3.57e-01 | 96.8% | 57.6% |
| 3972314 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 49.0 | 3.51e-01 | 95.8% | 59.3% |
| 4537543 | 3103.1.1.4 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_9 | 0.54 | 49.0 | 4.47e-01 | 100.0% | 93.6% |
| 5026283 | 300.1.1.6 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › Regulator_TrmB | 0.52 | 44.0 | 3.86e-01 | 89.5% | 80.0% |
| 4681706 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.52 | 39.0 | 3.31e-01 | 81.1% | 73.2% |
| 3969531 | 7581.1.1.0 ↗ | a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like | 0.51 | 43.0 | 2.90e-01 | 94.7% | 87.1% |
| 3481670 | 4205.1.1.3 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › SMI1_KNR4 | 0.51 | 40.0 | 3.21e-01 | 86.3% | 84.0% |
D3
medium
residues 139-200
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3df8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 38.0 | 3.17e-01 | 83.9% | 34.9% |
| 2zbkA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 36.0 | 2.82e-01 | 82.3% | 33.9% |