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Filtrate_w_scaffold_4_prodigal-single.1__X__X__00149

Bact-Vir

Filtrate_w_scaffold_4_prodigal-single.1__X__X__00149

Identity

Kingdom:
phage

Quality

68.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-130
PDB
Domain cluster: rep: pre1_saliva_scaffold_3_prodigal-single.1__X__X__00059__D13-114
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3go5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 33.0 3.76e-01 100.0% 78.5%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 34.0 4.08e-01 100.0% 98.6%
2ja9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 32.0 3.58e-01 100.0% 78.3%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.51 33.0 3.73e-01 100.0% 84.9%
2id0A04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 35.0 3.87e-01 100.0% 90.8%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4989464 2.1.1.16 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.59 35.0 3.73e-01 100.0% 66.3%
3609740 2.6.1.3 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › RIF5_SNase_1 0.51 36.0 3.35e-01 100.0% 57.8%
3627734 2.6.1.1 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase 0.51 34.0 3.08e-01 100.0% 50.0%
3582418 2.6.1.0 ↗ beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.50 33.0 3.02e-01 100.0% 49.3%