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Filtrate_w_scaffold_4_prodigal-single.1__X__X__00151
Bact-VirFiltrate_w_scaffold_4_prodigal-single.1__X__X__00151
Identity
- Kingdom:
- phage
Quality
90.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 47-97
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4jgwA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.61 | 44.0 | 3.13e-01 | 76.5% | 26.9% |
| 1sumB02 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.59 | 46.0 | 3.59e-01 | 98.0% | 38.1% |
D2
medium
residues 98-185
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5nl9A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 43.0 | 4.40e-01 | 72.7% | 59.5% |
| 3ol4A02 | 1.10.10.2390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.69 | 42.0 | 4.83e-01 | 71.6% | 88.3% |
| 4rayA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 39.0 | 4.03e-01 | 73.9% | 58.8% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.65 | 49.0 | 4.17e-01 | 79.5% | 87.7% |
| 3eyyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 37.0 | 3.80e-01 | 72.7% | 61.0% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 43.0 | 4.66e-01 | 72.7% | 93.0% |
| 1kkhA01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.61 | 47.0 | 3.71e-01 | 83.0% | 39.8% |
| 1tzvA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.61 | 46.0 | 3.92e-01 | 79.5% | 85.8% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 35.0 | 3.84e-01 | 70.5% | 72.5% |
| 1sqgA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.58 | 42.0 | 3.65e-01 | 77.3% | 79.4% |
| 4f91B04 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.58 | 41.0 | 3.58e-01 | 75.0% | 81.7% |
| 2a3vB01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.58 | 42.0 | 4.15e-01 | 79.5% | 72.3% |
| 1ff9A03 | 1.10.1870.10 | Mainly Alpha › Orthogonal Bundle › Domain 3, Saccharopine reductase › Domain 3, Saccharopine reductase | 0.57 | 40.0 | 3.92e-01 | 73.9% | 77.0% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.57 | 45.0 | 2.87e-01 | 84.1% | 93.5% |
| 7p2yd01 | 1.10.520.20 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.57 | 39.0 | 3.84e-01 | 75.0% | 63.6% |
| 2g5cB02 | 1.10.3660.10 | Mainly Alpha › Orthogonal Bundle › 6-phosphogluconate dehydrogenase C-terminal fold › 6-phosphogluconate dehydrogenase C-terminal like domain | 0.56 | 38.0 | 3.50e-01 | 70.5% | 82.7% |
| 4ihuA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 37.0 | 2.91e-01 | 72.7% | 73.6% |
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.53 | 39.0 | 3.87e-01 | 80.7% | 74.0% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.52 | 36.0 | 3.55e-01 | 77.3% | 67.0% |
| 2d2sA01 | 1.20.58.1210 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, N-terminal helical domain | 0.51 | 42.0 | 3.82e-01 | 88.6% | 73.3% |
| 4ksaA02 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.50 | 35.0 | 3.05e-01 | 72.7% | 56.9% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3723084 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.69 | 48.0 | 5.27e-01 | 71.6% | 91.4% |
| 3994728 | 7094.1.1.3 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › OPA1_C | 0.66 | 42.0 | 3.63e-01 | 72.7% | 40.7% |
| 2986816 | 563.1.1.0 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase | 0.64 | 43.0 | 3.43e-01 | 75.0% | 34.7% |
| 3448333 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.64 | 42.0 | 4.35e-01 | 72.7% | 72.5% |
| 3293469 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.64 | 41.0 | 4.76e-01 | 73.9% | 96.7% |
| 3230061 | 2004.1.1.200 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 | 0.62 | 44.0 | 3.07e-01 | 72.7% | 33.8% |
| 4600685 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.62 | 46.0 | 3.95e-01 | 78.4% | 85.0% |
| 3576491 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 42.0 | 4.31e-01 | 70.5% | 78.8% |
| 5052887 | 604.4.1.0 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP | 0.61 | 44.0 | 4.56e-01 | 76.1% | 93.8% |
| 3587004 | 195.1.1.1 ↗ | alpha complex topology › NusB-like › NusB-like › NusB-like › NusB | 0.61 | 45.0 | 3.79e-01 | 78.4% | 85.9% |
| 3385658 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.60 | 40.0 | 3.20e-01 | 71.6% | 34.7% |
| 3432362 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.59 | 42.0 | 3.72e-01 | 77.3% | 52.0% |
| 4625218 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.58 | 38.0 | 3.11e-01 | 73.9% | 34.7% |
| 3510771 | 610.4.1.0 ↗ | alpha arrays › ERP29 C domain-like › YqeY domain › YqeY domain | 0.57 | 43.0 | 4.21e-01 | 84.1% | 81.0% |
| 4390743 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.56 | 42.0 | 3.46e-01 | 79.5% | 92.1% |
| 4949752 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.55 | 41.0 | 3.62e-01 | 79.5% | 65.9% |
| 4002377 | 109.4.1.155 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med23 | 0.53 | 45.0 | 2.51e-01 | 97.7% | 73.2% |
| 3630501 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.53 | 38.0 | 2.57e-01 | 76.1% | 43.4% |
| 5068089 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.52 | 37.0 | 3.49e-01 | 76.1% | 77.4% |
| 4456963 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.52 | 44.0 | 3.58e-01 | 98.9% | 90.3% |
| 4883119 | 601.32.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › FusB family N-terminal domain › FusB family N-terminal domain › EF-G-binding_N | 0.51 | 35.0 | 3.35e-01 | 77.3% | 59.0% |
| 3933570 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.51 | 39.0 | 3.78e-01 | 86.4% | 75.0% |
| 3613315 | 1189.1.1.3 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › GARP | 0.50 | 33.0 | 2.53e-01 | 86.4% | 29.7% |