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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00025

Bact-Vir

Filtrate_w_scaffold_6_prodigal-single.1__X__X__00025

Identity

Kingdom:
phage

Quality

84.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-41
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vc1J00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.79 58.0 3.46e-01 89.7% 11.2%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.70 56.0 3.80e-01 92.3% 25.5%
2py5A04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.55 41.0 4.19e-01 92.3% 97.2%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3602308 4095.1.1.1 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.57 46.0 3.41e-01 92.3% 32.7%