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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00028
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00028
Identity
- Kingdom:
- phage
Quality
60.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-47
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aa0B01 | 1.20.58.570 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain | 0.81 | 65.0 | 4.99e-01 | 100.0% | 39.8% |
| 2pptA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.80 | 66.0 | 6.58e-01 | 100.0% | 91.9% |
| 2f9iD00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 63.0 | 3.74e-01 | 97.2% | 12.5% |
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.78 | 63.0 | 6.37e-01 | 100.0% | 94.4% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.77 | 69.0 | 6.29e-01 | 100.0% | 80.9% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.74 | 59.0 | 5.23e-01 | 100.0% | 60.7% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 47.0 | 4.06e-01 | 100.0% | 41.1% |
| 4xxbB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.72 | 54.0 | 5.26e-01 | 100.0% | 73.8% |
| 2nutA02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.68 | 55.0 | 4.76e-01 | 97.2% | 62.3% |
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.67 | 48.0 | 4.85e-01 | 97.2% | 85.3% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.67 | 56.0 | 4.75e-01 | 97.2% | 56.5% |
| 1v87A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 46.0 | 3.86e-01 | 97.2% | 48.2% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.60 | 48.0 | 4.53e-01 | 97.2% | 87.5% |
| 5aj3Q00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 43.0 | 3.20e-01 | 83.3% | 69.7% |
| 5wb7E00 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.57 | 37.0 | 3.41e-01 | 80.6% | 48.9% |
| 3abgB01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 40.0 | 2.75e-01 | 83.3% | 62.3% |
| 7aqbB02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.55 | 37.0 | 2.46e-01 | 72.2% | 17.2% |
| 2uuvB01 | 3.40.462.40 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › FAD-linked oxidase, cap domain/gating helix | 0.55 | 37.0 | 2.29e-01 | 83.3% | 9.4% |
| 1gp0A00 | 2.70.130.10 | Mainly Beta › Distorted Sandwich › Cation-dependent Mannose-6-phosphate Receptor; Chain A › Mannose-6-phosphate receptor binding domain | 0.52 | 37.0 | 2.86e-01 | 100.0% | 72.9% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.52 | 40.0 | 3.01e-01 | 100.0% | 92.2% |
| 4tvcA01 | 2.10.270.10 | Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding | 0.52 | 38.0 | 2.60e-01 | 97.2% | 44.7% |
| 3j7aZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.50 | 36.0 | 3.16e-01 | 91.7% | 66.7% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5021934 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.87 | 75.0 | 6.77e-01 | 100.0% | 80.0% |
| 3786601 | 375.1.1.200 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LSD1 | 0.85 | 68.0 | 6.86e-01 | 100.0% | 91.4% |
| 5045429 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 67.0 | 4.87e-01 | 100.0% | 33.7% |
| 4982196 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 70.0 | 7.14e-01 | 100.0% | 97.1% |
| 4960851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 65.0 | 6.66e-01 | 100.0% | 91.4% |
| 3387951 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.83 | 76.0 | 7.36e-01 | 100.0% | 90.0% |
| 4980605 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 72.0 | 6.66e-01 | 97.2% | 77.8% |
| 4980259 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 75.0 | 6.94e-01 | 100.0% | 80.0% |
| 4927429 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 71.0 | 6.91e-01 | 100.0% | 90.0% |
| 5060938 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 66.0 | 6.69e-01 | 97.2% | 94.3% |
| 5028514 | 375.1.1.63 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular | 0.81 | 72.0 | 6.02e-01 | 100.0% | 60.0% |
| 5038157 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.81 | 73.0 | 6.76e-01 | 100.0% | 80.0% |
| 5038137 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 72.0 | 6.93e-01 | 100.0% | 90.0% |
| 3173250 | 4050.1.1.1 ↗ | few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz › F_actin_cap_B | 0.80 | 66.0 | 6.07e-01 | 100.0% | 72.0% |
| 3307036 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.79 | 69.0 | 6.19e-01 | 97.2% | 76.0% |
| 5045117 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 67.0 | 5.62e-01 | 97.2% | 65.0% |
| 4982253 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 63.0 | 6.44e-01 | 100.0% | 97.1% |
| 5031238 | 375.1.1.329 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TackOD1 | 0.77 | 64.0 | 5.96e-01 | 100.0% | 75.6% |
| 3678481 | 375.1.1.69 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_12 | 0.77 | 66.0 | 6.48e-01 | 100.0% | 95.0% |
| 4959518 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 66.0 | 5.15e-01 | 100.0% | 48.7% |
| 3235875 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.76 | 65.0 | 5.28e-01 | 100.0% | 51.4% |
| 4010021 | 375.1.1.287 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › YnfU | 0.75 | 64.0 | 6.28e-01 | 100.0% | 90.0% |
| 3388521 | 375.1.1.219 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4H2 | 0.74 | 53.0 | 5.55e-01 | 100.0% | 93.3% |
| 3538506 | 375.1.1.217 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26040 | 0.74 | 62.0 | 5.63e-01 | 97.2% | 70.0% |
| 3688315 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 59.0 | 5.48e-01 | 97.2% | 70.0% |
| 3597692 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 62.0 | 5.64e-01 | 97.2% | 100.0% |
| 4955320 | 375.1.1.329 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TackOD1 | 0.73 | 61.0 | 5.69e-01 | 97.2% | 75.6% |
| 4951670 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 62.0 | 5.19e-01 | 100.0% | 55.4% |
| 4003584 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.73 | 59.0 | 4.89e-01 | 100.0% | 50.0% |
| 4582514 | 375.1.1.50 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_4 | 0.73 | 61.0 | 5.96e-01 | 97.2% | 90.0% |
| 3959677 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 51.0 | 4.45e-01 | 97.2% | 49.1% |
| 4245473 | 375.10.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf_DPOE_2 | 0.72 | 62.0 | 4.92e-01 | 100.0% | 70.7% |
| 3507936 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 61.0 | 3.93e-01 | 100.0% | 21.7% |
| 4995785 | 221.3.1.0 ↗ | a+b two layers › beta-Grasp › Immunoglobulin-binding domains › Immunoglobulin-binding domains | 0.72 | 62.0 | 5.43e-01 | 100.0% | 69.1% |
| 3318055 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 56.0 | 5.56e-01 | 97.2% | 87.5% |
| 4374415 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.71 | 57.0 | 4.56e-01 | 94.4% | 45.3% |
| 4929289 | 375.1.1.329 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TackOD1 | 0.70 | 60.0 | 4.97e-01 | 100.0% | 55.4% |
| 3917277 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.70 | 59.0 | 4.83e-01 | 100.0% | 54.3% |
| 3534694 | 4050.1.1.2 ↗ | few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz › F-actin_cap_A | 0.69 | 50.0 | 4.92e-01 | 97.2% | 73.3% |
| 5034087 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 56.0 | 5.55e-01 | 100.0% | 95.0% |
| 3268019 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.68 | 54.0 | 4.68e-01 | 97.2% | 61.5% |
| 3742502 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.68 | 54.0 | 4.12e-01 | 94.4% | 37.8% |
| 3568037 | 375.1.1.89 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like | 0.67 | 57.0 | 5.57e-01 | 100.0% | 90.0% |
| 3362626 | 375.1.1.30 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-Sec23_Sec24 | 0.67 | 54.0 | 4.37e-01 | 97.2% | 50.7% |
| 3414104 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 55.0 | 5.41e-01 | 100.0% | 90.0% |
| None | — | 0.66 | 53.0 | 3.15e-01 | 97.2% | 11.5% | |
| 3990815 | 355.1.1.2 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › PSI | 0.65 | 45.0 | 3.16e-01 | 100.0% | 20.8% |
| 3244152 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.65 | 52.0 | 4.24e-01 | 100.0% | 46.3% |
| 4951495 | 375.1.1.299 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf | 0.65 | 53.0 | 5.20e-01 | 100.0% | 90.0% |
| 3702861 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.65 | 52.0 | 4.71e-01 | 100.0% | 65.5% |
| 3593875 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 52.0 | 4.67e-01 | 100.0% | 65.5% |
| 3604642 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 50.0 | 4.85e-01 | 100.0% | 80.0% |
| 4318638 | 375.1.1.81 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_10 | 0.62 | 53.0 | 4.85e-01 | 100.0% | 72.0% |
| 5050300 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 45.0 | 4.62e-01 | 88.9% | 88.6% |
| 3612883 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.60 | 39.0 | 3.63e-01 | 77.8% | 51.1% |
| 3189994 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.59 | 45.0 | 3.64e-01 | 100.0% | 40.0% |
| 4028185 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.59 | 45.0 | 4.29e-01 | 100.0% | 72.0% |
| 4556132 | 375.1.1.74 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Mu-like_Com | 0.57 | 44.0 | 4.44e-01 | 97.2% | 94.3% |
| 3197786 | 376.1.3.75 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_Tbcl_Rhp7 | 0.55 | 41.0 | 3.87e-01 | 91.7% | 72.0% |
| 3175591 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.53 | 45.0 | 3.22e-01 | 100.0% | 78.3% |
| 3719787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 38.0 | 3.88e-01 | 97.2% | 92.5% |
| 3738728 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.51 | 42.0 | 3.19e-01 | 100.0% | 73.7% |