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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00132
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00132
Identity
- Kingdom:
- phage
Quality
74.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 6-92
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yrxC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 44.0 | 4.20e-01 | 78.2% | 86.5% |
| 4oj3B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 4.24e-01 | 75.9% | 90.5% |
| 2abyA00 | 3.30.70.1980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF09406, DUF2004 | 0.58 | 43.0 | 3.88e-01 | 79.3% | 83.6% |
| 3trgA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 41.0 | 4.06e-01 | 75.9% | 90.4% |
| 6w72A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 44.0 | 3.90e-01 | 85.1% | 98.5% |
| 1x0pA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 3.91e-01 | 77.0% | 95.8% |
| 6usmB01 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.55 | 44.0 | 3.72e-01 | 87.4% | 100.0% |
| 2bycB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 47.0 | 4.17e-01 | 98.9% | 93.2% |
| 6w08A01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.53 | 39.0 | 2.70e-01 | 79.3% | 96.0% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.53 | 39.0 | 2.97e-01 | 78.2% | 59.0% |
| 1m55A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.53 | 45.0 | 3.64e-01 | 100.0% | 89.1% |
| 4bfmA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.53 | 44.0 | 3.11e-01 | 96.6% | 46.6% |
| 2vd5B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 40.0 | 3.12e-01 | 82.8% | 49.7% |
| 4ndhB00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.52 | 39.0 | 3.14e-01 | 80.5% | 60.1% |
| 8ab6B02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 40.0 | 3.15e-01 | 83.9% | 61.6% |
| 2o07A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 44.0 | 3.33e-01 | 96.6% | 44.7% |
| 4mt1A02 | 3.30.70.1430 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.51 | 40.0 | 3.87e-01 | 87.4% | 93.2% |
| 4a55A01 | 3.10.20.770 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.50 | 34.0 | 2.39e-01 | 70.1% | 35.8% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3450410 | 11.1.1.389 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C | 0.67 | 51.0 | 3.83e-01 | 80.5% | 59.0% |
| 3776911 | 304.110.1.8 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › PF28302 | 0.63 | 57.0 | 4.51e-01 | 100.0% | 96.6% |
| 3615490 | 312.1.1.23 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › GDH_2nd | 0.62 | 55.0 | 4.31e-01 | 100.0% | 82.6% |
| 3949622 | 312.1.1.4 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › CDH | 0.60 | 43.0 | 4.16e-01 | 83.9% | 66.0% |
| 4551889 | 304.110.1.2 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › BLUF | 0.59 | 44.0 | 3.98e-01 | 80.5% | 78.4% |
| 2672738 | 304.110.1.2 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › BLUF | 0.59 | 46.0 | 3.88e-01 | 85.1% | 88.1% |
| 3413107 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.59 | 45.0 | 3.63e-01 | 81.6% | 78.7% |
| 3649918 | 11.1.1.389 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EDR2_C | 0.59 | 52.0 | 3.77e-01 | 97.7% | 53.3% |
| 3900562 | 304.110.1.7 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › TEX47 | 0.58 | 50.0 | 3.97e-01 | 100.0% | 81.1% |
| 185955 | 3428.1.1.1 ↗ | a+b two layers › hypothetical protein TA0743 › hypothetical protein TA0743 › hypothetical protein TA0743 › DUF2004 | 0.58 | 43.0 | 3.88e-01 | 79.3% | 83.6% |
| 3856913 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 45.0 | 2.99e-01 | 83.9% | 43.9% |
| 1307360 | 206.1.1.78 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kinase-like | 0.58 | 48.0 | 3.32e-01 | 95.4% | 50.3% |
| 3496813 | 304.110.1.7 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › TEX47 | 0.57 | 49.0 | 3.83e-01 | 100.0% | 78.0% |
| 1839988 | 304.110.1.2 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › BLUF | 0.57 | 43.0 | 3.68e-01 | 80.5% | 74.5% |
| 2323850 | 4031.1.1.0 ↗ | a+b three layers › Nigritoxin middle domain › Nigritoxin middle domain › Nigritoxin middle domain | 0.56 | 49.0 | 3.92e-01 | 100.0% | 71.7% |
| 3315689 | 206.1.1.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase,Pkinase_C | 0.55 | 46.0 | 2.94e-01 | 96.6% | 43.7% |
| None | — | 0.55 | 46.0 | 3.04e-01 | 96.6% | 41.7% | |
| 4050297 | 304.110.1.2 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › BLUF | 0.55 | 41.0 | 3.84e-01 | 82.8% | 83.5% |
| 3592453 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.54 | 47.0 | 3.72e-01 | 100.0% | 77.4% |
| 4946589 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.54 | 44.0 | 3.57e-01 | 92.0% | 97.8% |
| 4228032 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.54 | 46.0 | 3.15e-01 | 96.6% | 54.0% |
| 3683769 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.54 | 45.0 | 2.95e-01 | 96.6% | 38.9% |
| 3191606 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 45.0 | 3.02e-01 | 95.4% | 50.4% |
| 3252191 | 206.1.1.87 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, RIO1 | 0.53 | 45.0 | 3.08e-01 | 96.6% | 56.5% |
| 1182828 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.53 | 39.0 | 2.97e-01 | 78.2% | 59.3% |
| 3194703 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 46.0 | 3.07e-01 | 98.9% | 49.2% |
| 3786753 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.53 | 44.0 | 3.10e-01 | 96.6% | 56.2% |
| 3609872 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 44.0 | 3.03e-01 | 96.6% | 53.9% |
| 3596770 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 44.0 | 3.03e-01 | 96.6% | 54.1% |
| 3543686 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 45.0 | 2.99e-01 | 97.7% | 48.8% |
| 3519213 | 109.4.1.2122 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Zw10_middle, ZW10_C2 | 0.53 | 42.0 | 2.60e-01 | 89.7% | 36.6% |
| 4048443 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.52 | 37.0 | 2.46e-01 | 72.4% | 27.7% |
| 3239723 | 206.1.1.72 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal | 0.52 | 44.0 | 2.95e-01 | 96.6% | 49.6% |
| 3780198 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 44.0 | 2.65e-01 | 100.0% | 20.8% |
| 3792405 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.51 | 43.0 | 2.74e-01 | 97.7% | 36.8% |
| 3813808 | 206.1.1.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase,Pkinase_C | 0.51 | 44.0 | 2.83e-01 | 100.0% | 42.8% |
| 3539279 | 2484.1.1.15 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 | 0.50 | 37.0 | 2.86e-01 | 79.3% | 53.0% |
| 3397689 | 243.1.1.91 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4518 | 0.50 | 37.0 | 3.13e-01 | 80.5% | 70.6% |
| 4048672 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.50 | 43.0 | 2.69e-01 | 100.0% | 27.2% |
| 3233107 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 43.0 | 2.84e-01 | 100.0% | 39.5% |
| 3321803 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 42.0 | 2.57e-01 | 100.0% | 22.5% |