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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00137
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00137
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-166
Domain cluster:
rep: IMGVR_UViG_3300037454_000906-3300037454-Ga0394156_0000018_1594_2007__D12-136
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.63 | 28.0 | 4.30e-01 | 89.3% | 98.5% |
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 25.0 | 3.81e-01 | 88.7% | 96.6% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.61 | 46.0 | 3.89e-01 | 78.0% | 83.6% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.61 | 24.0 | 3.29e-01 | 91.2% | 68.2% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.58 | 26.0 | 3.82e-01 | 88.7% | 92.1% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.56 | 29.0 | 2.60e-01 | 98.1% | 33.3% |
| 2jbrA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 34.0 | 3.26e-01 | 92.5% | 52.4% |
| 3ibpA01 | 1.20.58.850 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 25.0 | 3.75e-01 | 86.2% | 98.6% |
| 3dtoA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.54 | 25.0 | 3.33e-01 | 92.5% | 79.5% |
| 3pe0A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 28.0 | 3.37e-01 | 88.1% | 76.4% |
| 4ertA01 | 1.10.490.160 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.50 | 28.0 | 2.85e-01 | 84.3% | 50.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3971072 | 5058.1.1.0 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region | 0.66 | 31.0 | 3.94e-01 | 74.2% | 73.7% |
| 4977468 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.62 | 32.0 | 4.12e-01 | 78.6% | 85.6% |
| 3581263 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 27.0 | 3.44e-01 | 97.5% | 67.0% |
| 3662730 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.60 | 36.0 | 2.92e-01 | 84.9% | 32.0% |
| 4683346 | 5041.1.1.1 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › ATP-synt_C | 0.57 | 28.0 | 3.83e-01 | 74.8% | 93.7% |
| 4525420 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 40.0 | 2.86e-01 | 88.1% | 24.3% |
| 3383693 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.56 | 21.0 | 2.12e-01 | 82.4% | 28.7% |
| 3467691 | 150.5.1.76 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › DUF1110 | 0.54 | 28.0 | 3.54e-01 | 88.7% | 88.2% |
| 3601492 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 38.0 | 2.96e-01 | 95.6% | 32.0% |
| 3288944 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.51 | 44.0 | 3.68e-01 | 98.7% | 53.6% |