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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00206
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00206
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-156
Domain cluster:
rep: qh_7_scaffold_1_prodigal-single.1__X__X__00270__D19-156
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01327.27 best | Pep_deformylase | 72.5 | 4.20e-20 | 94.5% | 86.5% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zxzB00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.91 | 88.0 | 7.87e-01 | 100.0% | 90.1% |
| 3qu1A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.91 | 85.0 | 8.06e-01 | 96.6% | 86.3% |
| 5mteA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.91 | 80.0 | 8.25e-01 | 91.1% | 95.6% |
| 1lmeA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.91 | 83.0 | 8.17e-01 | 95.2% | 89.6% |
| 1rl4B00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.90 | 84.0 | 8.17e-01 | 96.6% | 89.1% |
| 3g5kA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.90 | 87.0 | 7.90e-01 | 100.0% | 94.0% |
| 3u04A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.90 | 84.0 | 7.85e-01 | 96.6% | 88.4% |
| 1szzA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.89 | 85.0 | 7.95e-01 | 100.0% | 95.3% |
| 3e3uA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.88 | 82.0 | 7.29e-01 | 96.6% | 82.1% |
| 1lm4A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.87 | 83.0 | 7.45e-01 | 98.6% | 86.3% |
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.55 | 24.0 | 3.26e-01 | 84.2% | 78.4% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 32.0 | 3.98e-01 | 89.0% | 98.8% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 19.0 | 2.94e-01 | 72.6% | 80.4% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 35.0 | 3.92e-01 | 74.0% | 90.8% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3987299 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.94 | 80.0 | 8.31e-01 | 90.4% | 94.1% |
| 4420329 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 87.0 | 7.89e-01 | 97.3% | 82.2% |
| 4086694 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 87.0 | 8.61e-01 | 96.6% | 94.0% |
| 3401134 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 86.0 | 7.76e-01 | 97.3% | 87.3% |
| 3440362 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 88.0 | 7.94e-01 | 100.0% | 90.5% |
| 2579249 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 84.0 | 8.11e-01 | 94.5% | 94.3% |
| 4133607 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 88.0 | 8.53e-01 | 100.0% | 93.1% |
| 4220709 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.92 | 86.0 | 8.04e-01 | 96.6% | 88.2% |
| 4096233 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 85.0 | 7.94e-01 | 96.6% | 86.2% |
| 3710708 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 88.0 | 7.66e-01 | 100.0% | 85.9% |
| 4030761 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 88.0 | 8.50e-01 | 100.0% | 93.1% |
| 4256308 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 85.0 | 8.22e-01 | 96.6% | 90.6% |
| 2121396 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 79.0 | 8.23e-01 | 91.1% | 95.6% |
| 4325293 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 85.0 | 7.74e-01 | 97.3% | 86.5% |
| 4336204 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 88.0 | 7.94e-01 | 100.0% | 93.5% |
| 4999343 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 88.0 | 8.36e-01 | 100.0% | 94.5% |
| 4039287 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.91 | 85.0 | 7.95e-01 | 96.6% | 85.3% |
| 3966296 | 289.1.1.0 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase | 0.91 | 84.0 | 8.04e-01 | 96.6% | 88.5% |
| 981342 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 85.0 | 7.75e-01 | 97.3% | 82.4% |
| 4539518 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 7.56e-01 | 96.6% | 86.3% |
| 4470382 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 7.69e-01 | 95.9% | 86.1% |
| 4275485 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 7.91e-01 | 96.6% | 85.9% |
| 3427612 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 7.63e-01 | 96.6% | 80.5% |
| 3693404 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 7.55e-01 | 96.6% | 89.5% |
| 4422867 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 7.54e-01 | 96.6% | 77.4% |
| 4224338 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 7.54e-01 | 96.6% | 84.2% |
| 4220705 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 86.0 | 7.94e-01 | 100.0% | 93.3% |
| 4628922 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 86.0 | 7.95e-01 | 100.0% | 93.9% |
| 140542 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 7.72e-01 | 96.6% | 87.7% |
| 168447 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 83.0 | 7.58e-01 | 96.6% | 81.0% |
| 3276058 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.90 | 84.0 | 7.91e-01 | 97.3% | 92.4% |
| 1877349 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.89 | 86.0 | 8.08e-01 | 100.0% | 95.3% |
| 4113678 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.89 | 83.0 | 7.53e-01 | 96.6% | 89.1% |
| 167197 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.89 | 82.0 | 7.20e-01 | 96.6% | 83.9% |
| 4165265 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.89 | 85.0 | 7.42e-01 | 100.0% | 87.7% |
| 170021 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.88 | 82.0 | 7.29e-01 | 96.6% | 82.1% |
| 4215094 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.88 | 81.0 | 7.38e-01 | 96.6% | 87.6% |
| 4443928 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.88 | 81.0 | 7.32e-01 | 96.6% | 85.3% |
| 3596563 | 289.1.1.0 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase | 0.87 | 84.0 | 7.24e-01 | 100.0% | 91.4% |
| 3607053 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.87 | 84.0 | 6.84e-01 | 100.0% | 78.4% |
| 4454013 | 289.1.1.1 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase | 0.87 | 82.0 | 7.55e-01 | 98.6% | 90.6% |
| 5044200 | 289.1.1.0 ↗ | a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase | 0.77 | 65.0 | 6.25e-01 | 89.0% | 89.1% |
| 5014255 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.53 | 35.0 | 3.65e-01 | 74.0% | 71.1% |
D2
medium
residues 169-206
Domain cluster:
representative