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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00223
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00223
Identity
- Kingdom:
- phage
Quality
91.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-68
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eb8B01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.65 | 48.0 | 4.95e-01 | 81.8% | 85.2% |
| 3h1tA01 | 3.90.1570.30 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.65 | 43.0 | 3.41e-01 | 72.7% | 32.8% |
| 1jovA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.63 | 37.0 | 2.47e-01 | 71.2% | 14.1% |
| 2erfA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.62 | 42.0 | 2.89e-01 | 71.2% | 22.0% |
| 3kvpA00 | 6.20.140.10 | Special › Other non-globular › Immunoglobulin-like › | 0.61 | 37.0 | 4.32e-01 | 72.7% | 93.0% |
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.60 | 42.0 | 4.10e-01 | 74.2% | 69.7% |
| 3gceA00 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.59 | 37.0 | 3.27e-01 | 71.2% | 40.4% |
| 5bukB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 43.0 | 2.61e-01 | 77.3% | 18.3% |
| 1sz2A02 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.58 | 48.0 | 3.45e-01 | 93.9% | 40.5% |
| 3u4yA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 41.0 | 2.64e-01 | 75.8% | 35.7% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 42.0 | 3.40e-01 | 81.8% | 64.7% |
| 4my0A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 39.0 | 3.03e-01 | 72.7% | 53.6% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.55 | 49.0 | 4.03e-01 | 100.0% | 68.9% |
| 3wirA03 | 2.60.420.10 | Mainly Beta › Sandwich › Maltose phosphorylase, domain 3 › Maltose phosphorylase, domain 3 | 0.55 | 36.0 | 3.62e-01 | 71.2% | 65.2% |
| 3a1jB00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 41.0 | 2.68e-01 | 78.8% | 91.4% |
| 2a22B00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.55 | 41.0 | 2.97e-01 | 83.3% | 97.5% |
| 6h5bB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.54 | 49.0 | 4.01e-01 | 100.0% | 64.7% |
| 3k1lA01 | 3.30.457.40 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.54 | 38.0 | 3.44e-01 | 74.2% | 54.3% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 44.0 | 2.88e-01 | 90.9% | 49.5% |
| 1jofA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 43.0 | 2.74e-01 | 92.4% | 28.8% |
| 2o18A00 | 3.10.520.10 | Alpha Beta › Roll › T-fold › ApbE-like domains | 0.53 | 46.0 | 3.02e-01 | 98.5% | 36.2% |
| 1y4oA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.53 | 46.0 | 4.01e-01 | 100.0% | 64.4% |
| 1m5hA02 | 3.30.70.520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 36.0 | 2.93e-01 | 74.2% | 53.4% |
| 5llwA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 43.0 | 3.89e-01 | 100.0% | 65.2% |
| 3fhlA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 35.0 | 2.59e-01 | 71.2% | 66.8% |
| 4hs5A00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.51 | 40.0 | 3.46e-01 | 84.8% | 58.1% |
| 6w0pA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 43.0 | 2.66e-01 | 97.0% | 30.4% |
| 7dpyB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.51 | 35.0 | 3.30e-01 | 75.8% | 57.8% |
| 1j3wC00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.50 | 43.0 | 3.53e-01 | 100.0% | 68.4% |
ECOD (65)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3736764 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.77 | 53.0 | 3.81e-01 | 71.2% | 41.7% |
| 3988984 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.70 | 46.0 | 3.48e-01 | 72.7% | 28.1% |
| 5071935 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.68 | 46.0 | 3.72e-01 | 71.2% | 36.2% |
| 4984108 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.66 | 47.0 | 3.93e-01 | 75.8% | 42.5% |
| 3972934 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.66 | 59.0 | 5.04e-01 | 100.0% | 80.0% |
| 5080826 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.66 | 44.0 | 3.45e-01 | 72.7% | 31.7% |
| 3728783 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.66 | 47.0 | 3.74e-01 | 77.3% | 44.3% |
| 5079606 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.66 | 48.0 | 3.60e-01 | 78.8% | 56.7% |
| 4944138 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 44.0 | 3.79e-01 | 71.2% | 43.8% |
| 1166895 | 2008.1.1.100 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › HSDR_N_2 | 0.65 | 43.0 | 3.30e-01 | 72.7% | 29.2% |
| 1171971 | 66.1.1.3 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain › Sol_Rieske_ferrdox | 0.65 | 41.0 | 4.76e-01 | 98.5% | 100.0% |
| 3701440 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.65 | 50.0 | 4.51e-01 | 93.9% | 61.1% |
| 5063524 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.64 | 55.0 | 4.18e-01 | 100.0% | 39.6% |
| 3929344 | 3409.1.1.1 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 | 0.64 | 51.0 | 3.63e-01 | 86.4% | 30.5% |
| 4000746 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.64 | 50.0 | 4.52e-01 | 97.0% | 62.9% |
| 4147605 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.64 | 44.0 | 2.94e-01 | 72.7% | 93.2% |
| 3698579 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.63 | 52.0 | 4.39e-01 | 97.0% | 54.5% |
| 3479048 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 48.0 | 4.31e-01 | 93.9% | 60.0% |
| 4046575 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.63 | 45.0 | 3.76e-01 | 75.8% | 70.4% |
| 5043790 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.63 | 47.0 | 3.83e-01 | 81.8% | 43.0% |
| 4203354 | 252.2.1.9 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › PF27551 | 0.63 | 54.0 | 4.71e-01 | 92.4% | 71.6% |
| 3200218 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 50.0 | 3.50e-01 | 89.4% | 91.6% |
| 5059169 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 46.0 | 3.74e-01 | 100.0% | 39.3% |
| 3183393 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.62 | 52.0 | 4.61e-01 | 100.0% | 64.2% |
| 3599007 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 48.0 | 4.23e-01 | 90.9% | 57.0% |
| 4881091 | 286.1.1.5 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › CntK_N | 0.61 | 46.0 | 3.85e-01 | 81.8% | 46.2% |
| 3595721 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.61 | 47.0 | 2.89e-01 | 84.8% | 22.4% |
| 3394732 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.60 | 46.0 | 4.22e-01 | 97.0% | 62.2% |
| 3628286 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.60 | 54.0 | 4.29e-01 | 100.0% | 65.4% |
| 4440297 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.60 | 55.0 | 4.21e-01 | 100.0% | 60.0% |
| None | — | 0.58 | 51.0 | 3.65e-01 | 97.0% | 74.4% | |
| 3614060 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 41.0 | 2.55e-01 | 74.2% | 38.0% |
| 5079015 | 2484.1.1.71 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RACo_C_ter | 0.58 | 48.0 | 3.32e-01 | 92.4% | 65.3% |
| 3324429 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.58 | 51.0 | 3.96e-01 | 100.0% | 84.7% |
| 3513247 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.58 | 46.0 | 4.12e-01 | 100.0% | 61.1% |
| 4971771 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.58 | 47.0 | 3.57e-01 | 100.0% | 36.9% |
| 3414531 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.57 | 45.0 | 4.06e-01 | 100.0% | 61.1% |
| 5047082 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.57 | 47.0 | 4.24e-01 | 93.9% | 67.4% |
| 3389592 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.56 | 46.0 | 3.96e-01 | 100.0% | 56.7% |
| 4943309 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 42.0 | 3.59e-01 | 100.0% | 47.4% |
| 2534584 | 66.1.1.0 ↗ | beta sandwiches › ISP domain › ISP domain › ISP domain | 0.56 | 44.0 | 4.62e-01 | 87.9% | 98.2% |
| 3485287 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.56 | 36.0 | 2.58e-01 | 72.7% | 21.0% |
| 5052370 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 51.0 | 4.25e-01 | 100.0% | 75.5% |
| 4944313 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 44.0 | 3.62e-01 | 100.0% | 45.2% |
| 4002901 | 223.2.1.12 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int | 0.55 | 48.0 | 3.83e-01 | 100.0% | 50.7% |
| 4979978 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 47.0 | 3.86e-01 | 100.0% | 66.4% |
| 4926979 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 48.0 | 4.03e-01 | 100.0% | 82.6% |
| 3401904 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.54 | 44.0 | 3.82e-01 | 93.9% | 57.3% |
| 5072402 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.54 | 47.0 | 3.88e-01 | 100.0% | 63.2% |
| 5048520 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 48.0 | 3.99e-01 | 100.0% | 67.8% |
| 5044707 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.53 | 48.0 | 3.87e-01 | 100.0% | 61.6% |
| 3464402 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.53 | 37.0 | 3.75e-01 | 75.8% | 73.8% |
| 4977878 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.53 | 46.0 | 3.84e-01 | 100.0% | 67.5% |
| 4928516 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 46.0 | 3.84e-01 | 100.0% | 75.4% |
| 5051250 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 46.0 | 3.72e-01 | 100.0% | 61.5% |
| 3270840 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.52 | 43.0 | 3.94e-01 | 93.9% | 70.0% |
| 3387446 | 7579.1.1.60 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF2920 | 0.52 | 45.0 | 2.82e-01 | 100.0% | 43.6% |
| 3965700 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.52 | 45.0 | 3.79e-01 | 100.0% | 65.5% |
| 3196528 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.52 | 42.0 | 4.35e-01 | 100.0% | 98.3% |
| 3775519 | 109.27.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK | 0.51 | 45.0 | 2.94e-01 | 100.0% | 23.3% |
| 3719908 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.51 | 43.0 | 2.71e-01 | 100.0% | 90.1% |
| 5048237 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.51 | 45.0 | 3.68e-01 | 100.0% | 66.9% |
| 4960515 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.51 | 45.0 | 3.77e-01 | 100.0% | 65.2% |
| 5075279 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 44.0 | 3.71e-01 | 98.5% | 58.3% |
| 4864637 | 7008.1.1.1 ↗ | alpha arrays › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › N-terminal domain of hexon-associated protein (IIIa) › Hex_IIIa | 0.51 | 37.0 | 2.96e-01 | 78.8% | 84.4% |
D2
medium
residues 72-106
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hr7B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 52.0 | 3.36e-01 | 80.0% | 18.1% |
| 5aj3P00 | 3.30.1320.10 | Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 | 0.68 | 63.0 | 4.22e-01 | 100.0% | 35.9% |
| 6r8gB02 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.64 | 58.0 | 3.63e-01 | 100.0% | 78.8% |
| 1qgiA01 | 3.30.386.10 | Alpha Beta › 2-Layer Sandwich › Chitosanase; Chain A, domain 2 › Chitosanase, subunit A, domain 2 | 0.59 | 46.0 | 3.07e-01 | 88.6% | 24.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4507743 | 2003.1.1.76 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SDH_C | 0.72 | 60.0 | 3.71e-01 | 91.4% | 96.7% |
| 3243252 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 51.0 | 4.22e-01 | 82.9% | 53.3% |