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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00235
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00235
Identity
- Kingdom:
- phage
Quality
78.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 51-118
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 57.0 | 5.92e-01 | 100.0% | 90.6% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 55.0 | 5.56e-01 | 100.0% | 89.4% |
| 2kgtA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 55.0 | 5.41e-01 | 100.0% | 81.9% |
| 1lomA00 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.61 | 35.0 | 3.09e-01 | 95.6% | 36.6% |
| 1ci3M02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 37.0 | 3.88e-01 | 94.1% | 77.6% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 46.0 | 4.33e-01 | 94.1% | 95.3% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 35.0 | 3.98e-01 | 97.1% | 87.8% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 42.0 | 4.22e-01 | 98.5% | 80.3% |
| 4tyzA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 42.0 | 3.70e-01 | 85.3% | 94.5% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 39.0 | 3.94e-01 | 92.6% | 77.6% |
| 1szzA00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.54 | 48.0 | 3.58e-01 | 100.0% | 50.9% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 44.0 | 4.13e-01 | 94.1% | 97.7% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.54 | 43.0 | 3.87e-01 | 94.1% | 91.3% |
| 3v8uA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.54 | 40.0 | 3.01e-01 | 80.9% | 90.5% |
| 1ud9A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.53 | 41.0 | 2.94e-01 | 89.7% | 45.9% |
| 1xdiA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 43.0 | 3.18e-01 | 98.5% | 68.3% |
| 1reoA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 42.0 | 3.48e-01 | 97.1% | 58.1% |
| 7byjA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 43.0 | 3.93e-01 | 94.1% | 89.5% |
| 4js8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 44.0 | 4.07e-01 | 94.1% | 92.1% |
| 3nixB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 43.0 | 2.75e-01 | 98.5% | 40.3% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.52 | 43.0 | 3.31e-01 | 97.1% | 88.1% |
| 4l8nA01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 43.0 | 3.90e-01 | 94.1% | 75.5% |
| 2r6uA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 39.0 | 3.29e-01 | 82.4% | 99.2% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 42.0 | 3.50e-01 | 88.2% | 67.2% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 42.0 | 2.95e-01 | 94.1% | 95.4% |
| 3f7wA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 44.0 | 4.04e-01 | 95.6% | 93.4% |
| 3ic8A01 | 3.40.30.110 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.51 | 44.0 | 3.34e-01 | 98.5% | 72.9% |
| 3dorA02 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 42.0 | 3.66e-01 | 92.6% | 89.7% |
| 1y8tA03 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.51 | 42.0 | 3.91e-01 | 94.1% | 79.5% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.51 | 43.0 | 3.05e-01 | 95.6% | 75.6% |
| 3frnA01 | 3.10.129.70 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.50 | 39.0 | 3.20e-01 | 88.2% | 74.1% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 40.0 | 3.50e-01 | 95.6% | 83.2% |
| 3m4aA03 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.50 | 41.0 | 3.53e-01 | 95.6% | 66.9% |
| 1j3wC00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.50 | 41.0 | 3.40e-01 | 95.6% | 72.9% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 40.0 | 3.66e-01 | 95.6% | 71.6% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989574 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 48.0 | 4.45e-01 | 100.0% | 55.3% |
| 3578208 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 48.0 | 5.24e-01 | 100.0% | 85.5% |
| 3631298 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.72 | 56.0 | 5.46e-01 | 100.0% | 77.3% |
| 3210707 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.71 | 56.0 | 5.88e-01 | 100.0% | 96.7% |
| 4041376 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 50.0 | 4.74e-01 | 100.0% | 63.7% |
| 157526 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.68 | 53.0 | 5.47e-01 | 98.5% | 92.1% |
| 3924377 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 47.0 | 5.09e-01 | 100.0% | 89.1% |
| 3969959 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 58.0 | 5.34e-01 | 100.0% | 73.3% |
| 3942573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 46.0 | 4.93e-01 | 100.0% | 87.9% |
| 3480200 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.64 | 56.0 | 5.44e-01 | 100.0% | 94.7% |
| 3932484 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 48.0 | 4.97e-01 | 100.0% | 85.9% |
| 4426276 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 48.0 | 4.81e-01 | 98.5% | 80.0% |
| 4446834 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.59 | 40.0 | 3.46e-01 | 70.6% | 46.0% |
| 4311691 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.57 | 40.0 | 3.28e-01 | 75.0% | 44.4% |
| 4596146 | 243.1.1.104 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Imm-NTF2 | 0.57 | 47.0 | 3.85e-01 | 92.6% | 83.8% |
| 4190716 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.57 | 40.0 | 3.43e-01 | 95.6% | 44.3% |
| 4983389 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.57 | 37.0 | 3.77e-01 | 86.8% | 69.2% |
| 3587789 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.57 | 39.0 | 3.46e-01 | 97.1% | 47.6% |
| 5044389 | 4.26.1.0 ↗ | beta barrels › SH3 › Chromatin protein Cren7 › Chromatin protein Cren7 | 0.57 | 39.0 | 4.44e-01 | 86.8% | 100.0% |
| 5080202 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.56 | 39.0 | 3.29e-01 | 73.5% | 47.2% |
| 4127839 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.55 | 36.0 | 3.54e-01 | 91.2% | 61.3% |
| 3639196 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.55 | 36.0 | 4.02e-01 | 86.8% | 93.9% |
| 4278906 | 2003.1.5.151 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23, Methyltransf_25 | 0.55 | 40.0 | 2.75e-01 | 79.4% | 90.1% |
| 5044394 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.54 | 35.0 | 3.95e-01 | 89.7% | 100.0% |
| 3789341 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.54 | 44.0 | 2.90e-01 | 95.6% | 40.9% |
| 3217772 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 48.0 | 4.50e-01 | 100.0% | 83.5% |
| 3255173 | 220.1.1.58 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like | 0.54 | 44.0 | 3.76e-01 | 94.1% | 85.2% |
| 3165403 | 4958.1.1.0 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit | 0.53 | 37.0 | 3.82e-01 | 80.9% | 78.5% |
| 2712015 | 220.1.1.19 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rttp106-like_middle | 0.53 | 44.0 | 4.18e-01 | 94.1% | 96.3% |
| 3214565 | 207.1.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 | 0.53 | 38.0 | 2.90e-01 | 76.5% | 58.8% |
| 3699518 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.53 | 40.0 | 3.40e-01 | 85.3% | 81.6% |
| 3508714 | 295.1.1.29 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ | 0.53 | 44.0 | 3.42e-01 | 95.6% | 93.8% |
| 3472026 | 220.1.1.27 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD | 0.53 | 42.0 | 3.61e-01 | 92.6% | 90.0% |
| 4016874 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.53 | 43.0 | 2.90e-01 | 97.1% | 46.1% |
| 3570527 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 44.0 | 3.65e-01 | 95.6% | 71.5% |
| 3865191 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.52 | 43.0 | 3.74e-01 | 94.1% | 76.4% |
| 3908519 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.52 | 43.0 | 3.63e-01 | 95.6% | 55.2% |
| 3737927 | 220.1.1.294 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26663 | 0.52 | 42.0 | 3.75e-01 | 97.1% | 81.8% |
| 3591463 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.52 | 42.0 | 3.60e-01 | 91.2% | 90.4% |
| 4068978 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 35.0 | 3.41e-01 | 92.6% | 62.7% |
| 3707456 | 223.2.1.10 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Gtr1_RagA | 0.52 | 41.0 | 3.25e-01 | 89.7% | 83.2% |
| 4373021 | 2.4.1.6 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal | 0.51 | 40.0 | 3.60e-01 | 86.8% | 67.7% |
| 3266298 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.51 | 41.0 | 3.43e-01 | 94.1% | 68.7% |
| 4159666 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.51 | 37.0 | 3.32e-01 | 83.8% | 51.4% |
| 3638604 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 41.0 | 3.45e-01 | 97.1% | 92.6% |
| 3593387 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 39.0 | 3.25e-01 | 88.2% | 78.4% |
| 4018116 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 40.0 | 3.49e-01 | 94.1% | 78.0% |
| 3423400 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.50 | 40.0 | 3.43e-01 | 94.1% | 84.0% |
| 3523646 | 6.1.1.11 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Fascin | 0.50 | 43.0 | 3.60e-01 | 100.0% | 99.2% |