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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00246
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00246
Identity
- Kingdom:
- phage
Quality
80.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-58
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rznA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.70 | 60.0 | 4.48e-01 | 98.3% | 80.0% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.68 | 60.0 | 4.54e-01 | 98.3% | 74.4% |
| 1gefA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.66 | 60.0 | 4.67e-01 | 100.0% | 74.2% |
| 3napB00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 42.0 | 2.77e-01 | 72.4% | 17.8% |
| 2qqzA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.59 | 43.0 | 3.49e-01 | 96.6% | 40.0% |
| 2i5bA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 43.0 | 2.87e-01 | 93.1% | 62.1% |
| 6w0pA02 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.52 | 40.0 | 2.46e-01 | 89.7% | 91.0% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 39.0 | 3.30e-01 | 86.2% | 73.6% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 36.0 | 3.21e-01 | 81.0% | 66.7% |
| 3uezC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.57e-01 | 87.9% | 92.8% |
| 1e3hA03 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.50 | 40.0 | 2.93e-01 | 100.0% | 78.4% |
| 2dcnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 42.0 | 2.69e-01 | 96.6% | 87.7% |
| 3ajdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 41.0 | 3.00e-01 | 100.0% | 85.6% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4972340 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.68 | 52.0 | 5.03e-01 | 100.0% | 73.8% |
| 5032035 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 55.0 | 5.12e-01 | 100.0% | 71.4% |
| 5028377 | 2008.1.1.221 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Endonuc_Holl | 0.67 | 45.0 | 4.21e-01 | 86.2% | 57.1% |
| 5033874 | 2008.1.1.221 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Endonuc_Holl | 0.66 | 42.0 | 3.87e-01 | 93.1% | 49.3% |
| 3503728 | 5.1.10.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › RAB3GAP2_N | 0.64 | 50.0 | 3.86e-01 | 89.7% | 51.0% |
| 3815770 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 50.0 | 3.73e-01 | 96.6% | 62.4% |
| 1713454 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.61 | 37.0 | 2.99e-01 | 81.0% | 31.5% |
| 5076831 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.61 | 41.0 | 3.13e-01 | 70.7% | 87.4% |
| 3932248 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 52.0 | 4.00e-01 | 100.0% | 51.4% |
| 5082493 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 46.0 | 3.98e-01 | 84.5% | 53.3% |
| 4930686 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 49.0 | 3.65e-01 | 100.0% | 49.4% |
| 3995925 | 325.1.7.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Biotin_lipoyl | 0.57 | 37.0 | 4.10e-01 | 72.4% | 86.7% |
| 3473571 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.56 | 45.0 | 4.06e-01 | 93.1% | 81.2% |
| 4947620 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.55 | 45.0 | 3.19e-01 | 100.0% | 58.3% |
| 4057479 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.55 | 49.0 | 3.06e-01 | 100.0% | 28.5% |
| 5079794 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.54 | 46.0 | 3.26e-01 | 100.0% | 42.6% |
| 4956911 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.54 | 45.0 | 3.20e-01 | 100.0% | 42.4% |
| 3404915 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.54 | 35.0 | 2.24e-01 | 87.9% | 11.3% |
| 4393576 | 2007.1.12.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase › Exonuc_VII_L | 0.53 | 46.0 | 3.04e-01 | 100.0% | 33.5% |
| 5010045 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.53 | 45.0 | 3.18e-01 | 100.0% | 41.0% |
| 5076312 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.53 | 44.0 | 3.18e-01 | 100.0% | 42.1% |
| 4942829 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.53 | 44.0 | 3.24e-01 | 100.0% | 47.2% |
| 4657887 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.53 | 45.0 | 3.22e-01 | 100.0% | 44.3% |
| 4942120 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.52 | 44.0 | 3.17e-01 | 100.0% | 44.9% |
| 3915577 | 11.1.1.852 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28276 | 0.51 | 38.0 | 2.78e-01 | 82.8% | 72.2% |
| 5051866 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.51 | 42.0 | 3.11e-01 | 100.0% | 45.6% |
| 4967351 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.51 | 43.0 | 3.11e-01 | 100.0% | 45.4% |
| 4357396 | 2.1.1.84 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_N | 0.50 | 35.0 | 2.94e-01 | 75.9% | 39.1% |
| 4976539 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.50 | 42.0 | 2.95e-01 | 100.0% | 41.5% |
| 3172579 | 5.1.4.128 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rax2 | 0.50 | 40.0 | 2.49e-01 | 87.9% | 22.7% |