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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00250
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00250
Identity
- Kingdom:
- phage
Quality
86.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-67
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g7sA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 47.0 | 3.33e-01 | 70.1% | 44.2% |
| 2ltuA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.66 | 48.0 | 4.97e-01 | 80.6% | 83.9% |
| 3py8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.63 | 56.0 | 4.32e-01 | 98.5% | 84.7% |
| 3n3dB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.62 | 53.0 | 3.46e-01 | 98.5% | 48.2% |
| 2ivxB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 44.0 | 3.74e-01 | 82.1% | 72.2% |
| 4dq5B00 | 1.10.530.50 | Mainly Alpha › Orthogonal Bundle › Lysozyme › Peptidase U40 | 0.57 | 42.0 | 3.29e-01 | 82.1% | 36.3% |
| 5ekdA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.56 | 47.0 | 4.08e-01 | 97.0% | 99.1% |
| 1rm6A05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.56 | 49.0 | 3.61e-01 | 97.0% | 51.4% |
| 2looA02 | 1.10.10.1740 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like | 0.55 | 36.0 | 3.52e-01 | 76.1% | 60.0% |
| 1i6kA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.53 | 44.0 | 3.83e-01 | 95.5% | 91.0% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.52 | 45.0 | 4.08e-01 | 97.0% | 97.8% |
| 3bgwA01 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.52 | 47.0 | 3.73e-01 | 100.0% | 85.5% |
| 1huxA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 44.0 | 3.40e-01 | 95.5% | 75.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014996 | 7094.1.1.0 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin | 0.70 | 52.0 | 4.52e-01 | 79.1% | 75.0% |
| 3969341 | 4964.1.1.0 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I | 0.69 | 64.0 | 5.05e-01 | 98.5% | 97.6% |
| 4086516 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.67 | 45.0 | 3.52e-01 | 76.1% | 31.3% |
| 1030234 | 103.1.1.21 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID | 0.66 | 48.0 | 4.97e-01 | 80.6% | 83.9% |
| 3938247 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.66 | 50.0 | 3.47e-01 | 80.6% | 64.3% |
| 3497102 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 51.0 | 3.33e-01 | 88.1% | 55.7% |
| 3516806 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.64 | 50.0 | 3.37e-01 | 88.1% | 22.5% |
| 4270580 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.63 | 50.0 | 3.28e-01 | 88.1% | 48.8% |
| 3958437 | 633.6.1.4 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_2 | 0.62 | 50.0 | 3.69e-01 | 100.0% | 34.1% |
| 3788329 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.61 | 49.0 | 3.35e-01 | 86.6% | 53.9% |
| 3988747 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.60 | 52.0 | 3.37e-01 | 100.0% | 69.4% |
| 4162117 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 43.0 | 3.25e-01 | 76.1% | 36.9% |
| 4947364 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.58 | 51.0 | 4.54e-01 | 97.0% | 83.2% |
| 4945431 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.58 | 50.0 | 4.39e-01 | 97.0% | 78.0% |
| 5007391 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.58 | 44.0 | 2.91e-01 | 82.1% | 95.1% |
| 3261595 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 46.0 | 3.14e-01 | 89.6% | 25.8% |
| 3196868 | 378.1.1.9 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_2 | 0.56 | 43.0 | 3.53e-01 | 86.6% | 91.9% |
| 3841729 | 1008.1.1.0 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain | 0.54 | 49.0 | 4.45e-01 | 100.0% | 92.2% |
| 3913251 | 102.1.1.7 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_PNT | 0.53 | 45.0 | 4.17e-01 | 100.0% | 94.4% |
| 5051961 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.52 | 44.0 | 2.72e-01 | 92.5% | 46.1% |
| 3499207 | 133.1.1.0 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) | 0.52 | 45.0 | 3.21e-01 | 100.0% | 69.3% |
| 5018484 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.52 | 37.0 | 3.51e-01 | 94.0% | 63.7% |
| 3466011 | 108.5.1.0 ↗ | alpha arrays › EF-hand › Helical insertion domain in malaria PfNDH2 › Helical insertion domain in malaria PfNDH2 | 0.51 | 38.0 | 3.51e-01 | 80.6% | 66.7% |