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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00253
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00253
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-165_212-221
Domain cluster:
rep: SRR1747023_scaffold_5_prodigal-single.1__X__X__00220__D6-190
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z4hA02 | 2.40.50.540 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain | 0.64 | 34.0 | 4.55e-01 | 71.7% | 96.5% |
| 1l0wA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 30.0 | 3.64e-01 | 73.0% | 83.0% |
| 3mxnB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 27.0 | 3.00e-01 | 73.0% | 58.8% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 22.0 | 2.83e-01 | 83.0% | 68.9% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 21.0 | 3.06e-01 | 92.5% | 89.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4948720 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.61 | 31.0 | 3.59e-01 | 72.3% | 66.4% |
| 5049149 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.60 | 22.0 | 3.21e-01 | 76.7% | 71.2% |
| 4642580 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 34.0 | 4.13e-01 | 74.2% | 86.7% |
| 4032678 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.58 | 33.0 | 4.04e-01 | 71.7% | 88.0% |
| 3990098 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.58 | 33.0 | 3.89e-01 | 71.7% | 80.0% |
| 4950136 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.56 | 22.0 | 3.11e-01 | 78.0% | 73.3% |
| 4975116 | 70.1.1.0 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like | 0.56 | 22.0 | 3.02e-01 | 77.4% | 68.8% |
| 4943785 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 32.0 | 3.42e-01 | 72.3% | 64.3% |
| 3932882 | 2.1.1.81 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 | 0.55 | 27.0 | 3.75e-01 | 98.7% | 95.0% |
| 4930449 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.54 | 22.0 | 3.02e-01 | 77.4% | 73.3% |
| 5011090 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.52 | 20.0 | 2.85e-01 | 77.4% | 72.0% |
| 3176281 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.51 | 24.0 | 3.26e-01 | 98.1% | 90.7% |