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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00305
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00305
Identity
- Kingdom:
- phage
Quality
92.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-113
Domain cluster:
rep: Filtrate_w_scaffold_3_prodigal-single.1__X__X__00373__D1-97
D2
medium
residues 114-185
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4j0eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 50.0 | 3.54e-01 | 93.1% | 40.6% |
| 4wqoD00 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.55 | 47.0 | 3.87e-01 | 100.0% | 84.4% |
| 3i83A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.53 | 44.0 | 3.72e-01 | 97.2% | 85.0% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.51 | 42.0 | 4.01e-01 | 95.8% | 100.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3989233 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.58 | 35.0 | 2.94e-01 | 81.9% | 31.9% |
| 4303968 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.58 | 46.0 | 3.17e-01 | 87.5% | 56.6% |
| 3959716 | 633.6.1.0 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like | 0.56 | 44.0 | 3.90e-01 | 87.5% | 66.4% |
| None | — | 0.56 | 41.0 | 3.32e-01 | 79.2% | 42.7% | |
| 3272287 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.55 | 45.0 | 4.15e-01 | 95.8% | 85.0% |
| 3436831 | 601.4.1.52 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › Auxin_canalis | 0.54 | 44.0 | 3.80e-01 | 97.2% | 56.9% |
| 3172784 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.54 | 41.0 | 3.66e-01 | 83.3% | 61.0% |
| 4059065 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.53 | 45.0 | 4.13e-01 | 97.2% | 77.8% |
| 5048048 | 4957.1.1.9 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit › HAAS | 0.53 | 37.0 | 3.65e-01 | 75.0% | 69.3% |
| 3631342 | 3559.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Med22 | 0.53 | 37.0 | 3.33e-01 | 75.0% | 67.6% |
| 3652381 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.51 | 44.0 | 3.83e-01 | 100.0% | 63.5% |
| 4594465 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.51 | 43.0 | 3.93e-01 | 94.4% | 72.6% |
| 3215718 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.50 | 39.0 | 3.79e-01 | 86.1% | 87.5% |