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Filtrate_w_scaffold_6_prodigal-single.1__X__X__00311
Bact-VirFiltrate_w_scaffold_6_prodigal-single.1__X__X__00311
Identity
- Kingdom:
- phage
Quality
85.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 22-141
Domain cluster:
representative
D2
medium
residues 142-212
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.79 | 49.0 | 4.45e-01 | 100.0% | 47.4% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 47.0 | 4.11e-01 | 98.6% | 42.2% |
| 1yz6A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.76 | 58.0 | 5.43e-01 | 81.7% | 86.2% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.75 | 53.0 | 4.51e-01 | 74.6% | 52.6% |
| 1f68A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.73 | 53.0 | 4.69e-01 | 77.5% | 78.6% |
| 2oceA01 | 1.10.10.650 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RuvA domain 2-like | 0.71 | 58.0 | 4.92e-01 | 87.3% | 85.0% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.70 | 48.0 | 4.83e-01 | 70.4% | 74.6% |
| 1yt3A03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.68 | 48.0 | 4.55e-01 | 73.2% | 76.8% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.65 | 49.0 | 3.04e-01 | 81.7% | 77.5% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.65 | 46.0 | 4.06e-01 | 74.6% | 77.5% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.64 | 47.0 | 4.39e-01 | 77.5% | 98.9% |
| 1i6kA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.64 | 45.0 | 3.95e-01 | 76.1% | 55.9% |
| 1sumB01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.64 | 53.0 | 4.64e-01 | 91.5% | 100.0% |
| 2jd3A01 | 6.10.290.20 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.63 | 44.0 | 4.31e-01 | 77.5% | 66.7% |
| 1t33A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.63 | 48.0 | 3.66e-01 | 80.3% | 57.6% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.62 | 53.0 | 3.86e-01 | 97.2% | 99.0% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.62 | 54.0 | 4.01e-01 | 94.4% | 69.3% |
| 3mvpA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 52.0 | 4.01e-01 | 90.1% | 64.4% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.62 | 43.0 | 4.02e-01 | 71.8% | 85.1% |
| 1zu4A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.62 | 45.0 | 4.23e-01 | 77.5% | 73.6% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.60 | 52.0 | 3.79e-01 | 95.8% | 63.1% |
| 3q9oA02 | 3.90.1350.10 | Alpha Beta › Alpha-Beta Complex › Exotoxin A, middle domain › Exotoxin A, middle domain | 0.57 | 40.0 | 3.06e-01 | 74.6% | 37.1% |
| 3wfwA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 40.0 | 3.29e-01 | 74.6% | 54.3% |
| 6a95A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 40.0 | 3.31e-01 | 74.6% | 67.5% |
| 2glzA00 | 3.30.1330.130 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › | 0.55 | 39.0 | 3.06e-01 | 73.2% | 87.2% |
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 47.0 | 3.28e-01 | 94.4% | 34.3% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.53 | 42.0 | 3.93e-01 | 85.9% | 95.5% |
| 2i2xB01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.50 | 39.0 | 3.55e-01 | 85.9% | 97.0% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3258488 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.92 | 46.0 | 4.05e-01 | 84.5% | 36.0% |
| 3971610 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.79 | 71.0 | 4.96e-01 | 100.0% | 86.4% |
| 5052428 | 605.6.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › HP1531-like › HP1531-like | 0.75 | 48.0 | 4.52e-01 | 93.0% | 54.8% |
| 3634896 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.73 | 48.0 | 4.03e-01 | 100.0% | 41.7% |
| 4934139 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.70 | 47.0 | 5.10e-01 | 70.4% | 85.0% |
| 5044960 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.69 | 51.0 | 4.95e-01 | 80.3% | 100.0% |
| 4045132 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.69 | 47.0 | 3.96e-01 | 100.0% | 45.5% |
| 3697355 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.68 | 47.0 | 3.55e-01 | 70.4% | 41.3% |
| 3927398 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.68 | 41.0 | 3.59e-01 | 93.0% | 40.0% |
| 3987389 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.68 | 48.0 | 2.83e-01 | 73.2% | 14.1% |
| 3587784 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.68 | 53.0 | 3.52e-01 | 83.1% | 22.7% |
| 3573038 | 4207.1.1.99 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › PF28139 | 0.68 | 47.0 | 4.30e-01 | 71.8% | 60.0% |
| 3634705 | 601.1.2.50 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › GIT1_C | 0.67 | 50.0 | 4.01e-01 | 80.3% | 72.9% |
| 3923557 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.66 | 48.0 | 3.33e-01 | 74.6% | 39.5% |
| 3940619 | 109.4.1.2546 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3, TPR_8, TPR_17, CHIP_TPR_N | 0.66 | 47.0 | 3.32e-01 | 73.2% | 27.5% |
| 1180303 | 632.19.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › RICH | 0.65 | 49.0 | 4.73e-01 | 81.7% | 100.0% |
| 4659702 | 101.1.11.16 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › Plasmid_stab_B | 0.64 | 46.0 | 4.35e-01 | 78.9% | 62.4% |
| 5026959 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.63 | 45.0 | 4.56e-01 | 76.1% | 100.0% |
| 4420321 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.63 | 50.0 | 4.19e-01 | 87.3% | 71.2% |
| 3937988 | 632.7.1.41 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › Rer1 | 0.63 | 49.0 | 4.35e-01 | 85.9% | 75.2% |
| 3282638 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.62 | 45.0 | 3.63e-01 | 77.5% | 77.8% |
| 3478615 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.59 | 47.0 | 3.22e-01 | 91.5% | 49.2% |
| 3748535 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 48.0 | 3.53e-01 | 88.7% | 68.6% |
| 3497102 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 47.0 | 3.10e-01 | 91.5% | 49.8% |