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GAM-1
Euk-VirPigeon_adenovirus_2
GAM-1__YP_009310452__Pigeon_adenovirus_2__1907767
Identity
- Accession:
- YP_009310452 ↗
- Protein ID:
- GAM-1
- Kingdom:
- euk
Quality
74.0
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Aviadenovirus›
Pigeon_adenovirus_2
TaxID: 1907767
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-170
Domain cluster:
representative
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.75 | 46.0 | 5.63e-01 | 95.3% | 94.8% |
| 1uw4A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.72 | 41.0 | 5.10e-01 | 100.0% | 91.2% |
| 3uebF00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.69 | 44.0 | 5.30e-01 | 90.0% | 96.0% |
| 6vh5C03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.69 | 39.0 | 4.91e-01 | 100.0% | 93.3% |
| 7o4xA01 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 39.0 | 4.63e-01 | 98.7% | 82.8% |
| 4fprB00 | 3.30.70.2910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 49.0 | 5.28e-01 | 100.0% | 86.7% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.68 | 37.0 | 4.37e-01 | 86.0% | 75.5% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.68 | 40.0 | 4.51e-01 | 93.3% | 76.1% |
| 2e7vA01 | 3.30.70.960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain | 0.67 | 45.0 | 5.27e-01 | 88.7% | 97.1% |
| 1p1lA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 39.0 | 4.61e-01 | 100.0% | 83.3% |
| 2nyiA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 39.0 | 4.76e-01 | 100.0% | 94.4% |
| 2fbjH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 28.0 | 3.84e-01 | 100.0% | 78.1% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 38.0 | 4.67e-01 | 100.0% | 92.3% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 38.0 | 4.69e-01 | 99.3% | 94.4% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 38.0 | 4.35e-01 | 100.0% | 78.0% |
| 1j2vA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 36.0 | 4.29e-01 | 100.0% | 80.2% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 37.0 | 4.26e-01 | 100.0% | 77.6% |
| 4ewtA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 46.0 | 5.19e-01 | 100.0% | 97.4% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 44.0 | 5.10e-01 | 100.0% | 98.1% |
| 1v8cA02 | 3.30.1370.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Molybdopterin cofactor biosynthesis MoaD-related, C-terminal domain | 0.64 | 35.0 | 4.68e-01 | 88.7% | 100.0% |
| 1cg2A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 45.0 | 5.08e-01 | 100.0% | 98.2% |
| 1o51A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 37.0 | 4.54e-01 | 99.3% | 96.6% |
| 4rx6D00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 38.0 | 4.38e-01 | 100.0% | 85.0% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 43.0 | 5.01e-01 | 100.0% | 99.1% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 34.0 | 4.16e-01 | 98.7% | 85.9% |
| 3gb0A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 4.82e-01 | 100.0% | 97.3% |
| 2f7vA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 41.0 | 4.74e-01 | 99.3% | 99.1% |
| 4jvuA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 33.0 | 3.77e-01 | 99.3% | 72.7% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 32.0 | 3.82e-01 | 100.0% | 78.0% |
| 2gjvA00 | 3.30.2000.10 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like | 0.58 | 45.0 | 4.78e-01 | 92.0% | 89.7% |
| 3tx8A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 42.0 | 4.76e-01 | 100.0% | 99.1% |
| 3lp8A04 | 3.90.600.10 | Alpha Beta › Alpha-Beta Complex › Glycinamide Ribonucleotide Synthetase; Chain A, domain 4 › Phosphoribosylglycinamide synthetase, C-terminal domain | 0.57 | 35.0 | 4.28e-01 | 100.0% | 97.8% |
| 6njyA01 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 44.0 | 4.74e-01 | 98.7% | 100.0% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 47.0 | 4.65e-01 | 90.0% | 93.7% |
| 5e4bA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 51.0 | 4.84e-01 | 99.3% | 94.9% |
| 3pfoA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 44.0 | 4.75e-01 | 100.0% | 100.0% |
| 1lg7A00 | 3.10.460.10 | Alpha Beta › Roll › VSV matrix protein › VSV matrix protein | 0.55 | 40.0 | 3.88e-01 | 100.0% | 67.7% |
| 3rt0C00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 47.0 | 4.50e-01 | 92.0% | 87.2% |
| 3nqnA00 | 3.30.530.70 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 | 0.54 | 45.0 | 4.57e-01 | 90.7% | 100.0% |
| 1tw0A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 45.0 | 4.50e-01 | 90.7% | 95.5% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.53 | 42.0 | 4.36e-01 | 90.0% | 90.1% |
| 5i8fA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 45.0 | 4.37e-01 | 90.7% | 92.1% |
| 4j37A02 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.53 | 46.0 | 4.27e-01 | 100.0% | 74.7% |
| 2pcsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 49.0 | 4.88e-01 | 100.0% | 100.0% |
| 3cnwA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 45.0 | 4.64e-01 | 92.0% | 98.6% |
| 2w2sA00 | 3.10.460.20 | Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 | 0.52 | 37.0 | 3.68e-01 | 100.0% | 68.7% |
| 3bzmA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.51 | 44.0 | 3.23e-01 | 94.7% | 40.3% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 43.0 | 4.40e-01 | 89.3% | 96.5% |
| 4l3tA04 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 46.0 | 3.83e-01 | 100.0% | 74.7% |
| 3amiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.51 | 46.0 | 4.19e-01 | 100.0% | 87.4% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.50 | 38.0 | 3.99e-01 | 100.0% | 86.9% |
| 2il5A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 43.0 | 4.22e-01 | 90.0% | 92.6% |
| 1fm4A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.50 | 43.0 | 4.25e-01 | 92.0% | 95.0% |
| 2i9dA00 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.50 | 44.0 | 3.86e-01 | 92.0% | 89.7% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4096709 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.78 | 47.0 | 5.79e-01 | 96.0% | 94.7% |
| 3838844 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.77 | 46.0 | 5.70e-01 | 96.0% | 94.7% |
| 3602520 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.73 | 38.0 | 5.19e-01 | 97.3% | 100.0% |
| 4562028 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.72 | 43.0 | 4.37e-01 | 92.0% | 60.7% |
| 3525488 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.71 | 53.0 | 5.71e-01 | 100.0% | 89.2% |
| 984477 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.71 | 45.0 | 5.42e-01 | 90.0% | 97.0% |
| 4467967 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.70 | 40.0 | 3.18e-01 | 91.3% | 28.1% |
| 3621161 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.70 | 51.0 | 5.68e-01 | 100.0% | 95.0% |
| 4619723 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.70 | 41.0 | 4.55e-01 | 85.3% | 72.5% |
| 1124197 | 304.141.1.1 ↗ | a+b two layers › Alpha-beta plaits › Avirulence Effector AvrLm4-7 › Avirulence Effector AvrLm4-7 › AvrLm4-7 | 0.69 | 50.0 | 5.32e-01 | 100.0% | 85.4% |
| 4941817 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.68 | 48.0 | 5.52e-01 | 100.0% | 98.2% |
| 4001734 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.68 | 47.0 | 5.28e-01 | 100.0% | 91.3% |
| 3226112 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.68 | 54.0 | 5.81e-01 | 100.0% | 96.9% |
| 3377143 | 304.166.1.3 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › DUF7036 | 0.67 | 47.0 | 5.25e-01 | 100.0% | 93.0% |
| 3796562 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.67 | 51.0 | 5.70e-01 | 100.0% | 100.0% |
| 4057397 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.66 | 39.0 | 4.43e-01 | 86.7% | 75.7% |
| 3289660 | 305.1.1.3 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › DUF3000 | 0.65 | 43.0 | 4.79e-01 | 92.7% | 84.2% |
| 3959045 | 305.1.1.0 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase | 0.65 | 43.0 | 4.79e-01 | 92.7% | 84.2% |
| 3605908 | 304.31.1.3 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › FAZ1_cons | 0.65 | 48.0 | 5.33e-01 | 99.3% | 96.7% |
| 4963976 | 331.6.1.1 ↗ | a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain › DUF1952 | 0.65 | 36.0 | 4.67e-01 | 87.3% | 100.0% |
| 3883294 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.64 | 50.0 | 5.39e-01 | 97.3% | 93.8% |
| 3932173 | 304.31.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase | 0.64 | 58.0 | 5.80e-01 | 100.0% | 96.0% |
| 5026139 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.64 | 45.0 | 5.17e-01 | 99.3% | 100.0% |
| 5030704 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.64 | 48.0 | 5.30e-01 | 100.0% | 98.3% |
| 3576418 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.64 | 39.0 | 4.39e-01 | 100.0% | 79.1% |
| 4961625 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.63 | 45.0 | 5.09e-01 | 100.0% | 97.4% |
| 3905320 | 304.166.1.10 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › PF29951 | 0.62 | 47.0 | 5.20e-01 | 100.0% | 100.0% |
| 4987575 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.62 | 43.0 | 4.85e-01 | 100.0% | 96.4% |
| 3554056 | 11.1.1.134 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL12p40_C | 0.62 | 40.0 | 4.39e-01 | 99.3% | 79.2% |
| 3611836 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.61 | 39.0 | 4.71e-01 | 100.0% | 96.0% |
| 5022426 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.61 | 45.0 | 5.00e-01 | 100.0% | 96.7% |
| 3842059 | 11.1.1.927 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29951 | 0.61 | 46.0 | 5.02e-01 | 100.0% | 96.0% |
| 4962702 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.60 | 48.0 | 5.17e-01 | 99.3% | 100.0% |
| 3965604 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.60 | 40.0 | 4.55e-01 | 90.0% | 88.7% |
| 5047753 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.60 | 43.0 | 4.78e-01 | 100.0% | 96.5% |
| 3442608 | 304.20.1.1 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP_RNA-bind | 0.59 | 46.0 | 4.72e-01 | 100.0% | 87.1% |
| 5077735 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.59 | 46.0 | 5.02e-01 | 98.7% | 100.0% |
| 3613865 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 50.0 | 4.88e-01 | 100.0% | 82.4% |
| 4593951 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 49.0 | 5.05e-01 | 100.0% | 95.0% |
| 3537229 | 310.3.1.21 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › HNOB | 0.58 | 31.0 | 3.62e-01 | 83.3% | 72.4% |
| 3715728 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 50.0 | 4.90e-01 | 100.0% | 85.0% |
| 4276635 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.58 | 38.0 | 4.49e-01 | 100.0% | 99.0% |
| 3797542 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 36.0 | 4.06e-01 | 100.0% | 81.8% |
| 4025670 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.58 | 41.0 | 4.52e-01 | 100.0% | 90.8% |
| 3711978 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.57 | 45.0 | 4.89e-01 | 99.3% | 100.0% |
| 4026379 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.57 | 47.0 | 4.75e-01 | 93.3% | 86.7% |
| 3699604 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.57 | 45.0 | 4.76e-01 | 100.0% | 94.1% |
| 5083549 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.57 | 32.0 | 3.33e-01 | 86.0% | 55.9% |
| 4679549 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.57 | 45.0 | 4.86e-01 | 99.3% | 100.0% |
| 4104942 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.57 | 44.0 | 4.71e-01 | 100.0% | 95.4% |
| 3273410 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.56 | 48.0 | 4.51e-01 | 92.0% | 92.4% |
| 4144462 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 48.0 | 4.93e-01 | 100.0% | 97.1% |
| 3596254 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.56 | 44.0 | 4.78e-01 | 100.0% | 100.0% |
| 3621347 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 42.0 | 4.61e-01 | 100.0% | 98.3% |
| 3446815 | 304.112.1.3 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoN | 0.55 | 33.0 | 4.01e-01 | 99.3% | 95.6% |
| 3704543 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.55 | 46.0 | 3.82e-01 | 90.0% | 72.1% |
| 3609563 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.55 | 46.0 | 3.88e-01 | 90.7% | 75.2% |
| 4575250 | 331.3.1.40 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 | 0.55 | 47.0 | 4.38e-01 | 92.0% | 89.7% |
| 3394266 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.55 | 41.0 | 4.55e-01 | 100.0% | 99.2% |
| 5039601 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 49.0 | 4.79e-01 | 100.0% | 90.3% |
| 3920188 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.54 | 45.0 | 3.92e-01 | 90.0% | 74.9% |
| 3425333 | 331.3.1.40 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 | 0.54 | 46.0 | 4.20e-01 | 91.3% | 92.8% |
| 5050905 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.53 | 42.0 | 3.86e-01 | 100.0% | 64.7% |
| 3595555 | 317.1.1.0 ↗ | a+b two layers › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase › Translation initiation factor eIF4e and phosphothreonine lyase | 0.53 | 45.0 | 3.93e-01 | 100.0% | 60.9% |
| 3967686 | 331.3.1.52 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PF28469 | 0.53 | 45.0 | 4.53e-01 | 93.3% | 99.4% |
| 3502450 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.53 | 40.0 | 4.30e-01 | 100.0% | 93.1% |
| 4955179 | 304.51.1.7 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR_Cas6 | 0.52 | 41.0 | 4.32e-01 | 100.0% | 95.4% |
| 3194350 | 331.3.1.30 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF3074 | 0.52 | 40.0 | 2.96e-01 | 81.3% | 67.2% |
| 3609610 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.52 | 47.0 | 3.80e-01 | 100.0% | 52.2% |
| 5065205 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.52 | 45.0 | 4.66e-01 | 98.7% | 100.0% |
| 5050071 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.52 | 47.0 | 4.61e-01 | 100.0% | 97.6% |
| 3242509 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.52 | 43.0 | 4.48e-01 | 100.0% | 97.8% |
| 3451883 | 331.3.1.40 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 | 0.51 | 43.0 | 3.94e-01 | 90.0% | 88.7% |
| 5073903 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.51 | 44.0 | 4.56e-01 | 99.3% | 100.0% |
| 4051950 | 331.3.1.1 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 | 0.50 | 43.0 | 4.29e-01 | 92.0% | 98.1% |
D2
high
residues 192-305
Domain cluster:
rep: ORF8__YP_007985672__Fowl_aviadenovirus_5__172861__D167-265
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2h1yA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.70 | 36.0 | 4.50e-01 | 91.2% | 81.4% |
| 4rr5A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.69 | 34.0 | 4.41e-01 | 88.6% | 84.4% |
| 2olnA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.65 | 48.0 | 4.25e-01 | 90.4% | 53.0% |
| 2cqiA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 39.0 | 4.13e-01 | 89.5% | 67.0% |
| 3g87A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.64 | 34.0 | 4.24e-01 | 91.2% | 86.6% |
| 3tqeA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.64 | 36.0 | 4.35e-01 | 91.2% | 86.3% |
| 2yg3A02 | 3.90.660.10 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.63 | 44.0 | 3.89e-01 | 88.6% | 50.0% |
| 2mouA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 54.0 | 4.36e-01 | 93.9% | 75.0% |
| 1wjwA01 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.62 | 44.0 | 4.99e-01 | 88.6% | 98.8% |
| 3im8A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.62 | 35.0 | 4.24e-01 | 91.2% | 86.3% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 35.0 | 4.15e-01 | 89.5% | 82.7% |
| 2i82B00 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.62 | 43.0 | 3.47e-01 | 88.6% | 37.9% |
| 2jfdA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.62 | 32.0 | 4.02e-01 | 92.1% | 84.8% |
| 1tw0A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 52.0 | 4.73e-01 | 94.7% | 98.1% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 34.0 | 3.86e-01 | 78.9% | 74.4% |
| 4rl1A02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.60 | 33.0 | 4.04e-01 | 90.4% | 85.9% |
| 3uebF00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.60 | 48.0 | 5.05e-01 | 93.0% | 98.0% |
| 1kohA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 36.0 | 3.85e-01 | 93.0% | 70.1% |
| 2ghpA03 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 36.0 | 4.14e-01 | 89.5% | 86.6% |
| 1wqwA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 50.0 | 4.30e-01 | 96.5% | 65.2% |
| 3l1aA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 50.0 | 4.09e-01 | 96.5% | 60.2% |
| 3fgvA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 39.0 | 4.22e-01 | 90.4% | 86.0% |
| 2ej9A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 49.0 | 4.21e-01 | 97.4% | 68.6% |
| 5fm5P00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 34.0 | 3.66e-01 | 94.7% | 69.4% |
| 1m0sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.55 | 33.0 | 3.98e-01 | 88.6% | 95.8% |
| 3nynB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 38.0 | 2.95e-01 | 71.1% | 89.4% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 30.0 | 3.48e-01 | 83.3% | 75.0% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 37.0 | 3.94e-01 | 93.0% | 80.4% |
| 3oovA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 41.0 | 3.61e-01 | 79.8% | 93.3% |
| 3w2zA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.53 | 37.0 | 3.26e-01 | 72.8% | 87.1% |
| 6hhnA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 36.0 | 3.91e-01 | 91.2% | 85.9% |
| 4xeaA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 46.0 | 3.67e-01 | 97.4% | 61.9% |
| 3ig5A02 | 3.30.590.50 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.52 | 46.0 | 3.24e-01 | 97.4% | 63.4% |
| 6p58A00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 39.0 | 3.58e-01 | 78.9% | 100.0% |
| 2l8oA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 43.0 | 3.98e-01 | 89.5% | 92.4% |
| 3dbaA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 37.0 | 3.25e-01 | 75.4% | 89.5% |
| 3mmhA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.51 | 38.0 | 3.43e-01 | 80.7% | 82.6% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3807249 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.68 | 52.0 | 5.44e-01 | 92.1% | 87.6% |
| 5022451 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.68 | 49.0 | 4.41e-01 | 91.2% | 54.8% |
| 4188535 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.68 | 43.0 | 4.94e-01 | 90.4% | 90.0% |
| 3970911 | 304.3.1.11 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MNHE | 0.68 | 42.0 | 4.40e-01 | 93.0% | 67.6% |
| 4964137 | 304.3.1.11 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MNHE | 0.67 | 42.0 | 4.23e-01 | 93.9% | 61.7% |
| 1515950 | 244.1.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase | 0.67 | 43.0 | 4.44e-01 | 88.6% | 68.5% |
| 3822456 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.65 | 49.0 | 5.02e-01 | 92.1% | 82.7% |
| 5011911 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.65 | 47.0 | 5.07e-01 | 93.9% | 90.5% |
| 4288649 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.65 | 35.0 | 4.29e-01 | 90.4% | 84.3% |
| 3397377 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.61 | 38.0 | 4.06e-01 | 89.5% | 72.6% |
| 3608890 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.60 | 54.0 | 4.24e-01 | 99.1% | 69.2% |
| 3593385 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.60 | 53.0 | 4.23e-01 | 96.5% | 66.2% |
| 6301 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.60 | 44.0 | 4.47e-01 | 89.5% | 77.7% |
| 4147865 | 304.3.1.11 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › MNHE | 0.60 | 38.0 | 3.90e-01 | 93.0% | 66.1% |
| 3250126 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.59 | 38.0 | 4.07e-01 | 89.5% | 75.0% |
| 3958221 | 304.55.1.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains | 0.59 | 43.0 | 3.88e-01 | 93.0% | 55.5% |
| 2605088 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.59 | 52.0 | 4.49e-01 | 98.2% | 78.7% |
| 3390872 | 304.9.1.182 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF30082 | 0.58 | 36.0 | 3.99e-01 | 89.5% | 77.8% |
| 3203931 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.58 | 48.0 | 3.67e-01 | 90.4% | 82.9% |
| 5033676 | 304.8.1.48 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MNHE | 0.58 | 39.0 | 3.98e-01 | 94.7% | 70.6% |
| 3925855 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.58 | 29.0 | 3.19e-01 | 75.4% | 56.7% |
| 3998323 | 304.9.1.58 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Nup35_RRM_2 | 0.58 | 35.0 | 3.60e-01 | 89.5% | 60.9% |
| 5038074 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.57 | 51.0 | 4.11e-01 | 99.1% | 70.3% |
| 3608237 | 304.55.2.8 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like › FAZ1_cons | 0.56 | 42.0 | 4.49e-01 | 93.9% | 96.8% |
| 3386233 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.55 | 49.0 | 4.23e-01 | 96.5% | 64.6% |
| 3499543 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.55 | 48.0 | 4.57e-01 | 96.5% | 84.4% |
| 4067303 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.55 | 38.0 | 3.26e-01 | 71.1% | 82.2% |
| 4283161 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.55 | 42.0 | 3.51e-01 | 79.8% | 90.0% |
| 2171566 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.55 | 48.0 | 3.96e-01 | 97.4% | 68.6% |
| 3818511 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.55 | 46.0 | 4.42e-01 | 91.2% | 95.4% |
| 3209816 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 43.0 | 3.96e-01 | 86.0% | 64.7% |
| 3839195 | 304.55.1.13 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Relaxase | 0.54 | 42.0 | 3.76e-01 | 93.0% | 56.5% |
| 3638408 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 42.0 | 3.81e-01 | 86.0% | 60.0% |
| 3966635 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 39.0 | 3.47e-01 | 76.3% | 87.6% |
| 4381193 | 304.55.1.6 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › MobA_MobL | 0.53 | 42.0 | 3.58e-01 | 92.1% | 51.1% |
| 4966102 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.53 | 37.0 | 3.22e-01 | 72.8% | 81.1% |
| 3401714 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 41.0 | 4.10e-01 | 97.4% | 79.2% |
| 4080305 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.53 | 33.0 | 3.66e-01 | 92.1% | 80.0% |
| 4965189 | 304.8.1.126 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26475 | 0.53 | 41.0 | 3.51e-01 | 88.6% | 51.4% |
| 4881486 | 11.1.1.220 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › UL141 | 0.52 | 38.0 | 3.12e-01 | 91.2% | 39.8% |
| 4962456 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.52 | 39.0 | 3.41e-01 | 78.9% | 85.1% |
| 4596042 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.52 | 39.0 | 3.44e-01 | 78.9% | 92.4% |
| 3785986 | 10.12.1.17 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy,DIOX_N | 0.52 | 37.0 | 2.61e-01 | 74.6% | 70.5% |
| 4887765 | 3623.1.1.1 ↗ | a+b two layers › Uncharacterized protein VC_0899 › Uncharacterized protein VC_0899 › Uncharacterized protein VC_0899 › DUF4478 | 0.51 | 45.0 | 4.49e-01 | 100.0% | 96.7% |
| 4968253 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 36.0 | 3.14e-01 | 73.7% | 85.0% |
| 3925806 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.51 | 41.0 | 4.06e-01 | 91.2% | 81.7% |
| 3891909 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 34.0 | 3.12e-01 | 94.7% | 50.3% |
| 3281607 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.51 | 37.0 | 3.14e-01 | 77.2% | 72.5% |
| 4989240 | 223.1.1.26 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_3 | 0.50 | 37.0 | 2.66e-01 | 75.4% | 96.0% |
| 4033409 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.50 | 44.0 | 3.82e-01 | 100.0% | 77.3% |