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GDP-d-mannose_4,6-dehydratase
Euk-VirHeterosigma_akashiwo_virus_01
GDP-d-mannose_4,6-dehydratase__YP_009507544__Heterosigma_akashiwo_virus_01__97195
Identity
- Accession:
- YP_009507544 ↗
- Protein ID:
- GDP-d-mannose_4,6-dehydratase
- Kingdom:
- euk
Quality
89.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Raphidovirus›
Heterosigma_akashiwo_virus_01
TaxID: 97195
Cluster
View cluster (115 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-204_245-268
Domain cluster:
rep: NC_043427__YP_009666084.1__FK997-gp39__00039__D5-203_243-266_355-370
Pfam (3)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16363.12 best | GDP_Man_Dehyd | 250.7 | 3.90e-74 | 87.9% | 55.1% |
| PF01370.28 | Epimerase | 156.8 | 8.80e-46 | 87.9% | 71.7% |
| PF04321.24 | RmlD_sub_bind | 34.6 | 1.50e-08 | 85.9% | 44.6% |
D2
high
residues 210-244_272-325_345-363
Domain cluster:
rep: GDP-D-mannose_dehydratase__YP_009325563__Only_Syngen_Nebraska_virus_5__1917232__D190-218_249-308_329-344
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16363.12 best | GDP_Man_Dehyd | 36.5 | 5.40e-09 | 62.0% | 16.6% |
| PF16363.12 | GDP_Man_Dehyd | 32.8 | 7.20e-08 | 34.3% | 10.2% |