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GDP-mannose_4,6-dehydratase
Euk-VirOstreococcus_lucimarinus_virus_OlV5
GDP-mannose_4,6-dehydratase__YP_007674887__Ostreococcus_lucimarinus_virus_OlV5__754064
Identity
- Accession:
- YP_007674887 ↗
- Protein ID:
- GDP-mannose_4,6-dehydratase
- Kingdom:
- euk
Quality
92.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Algavirales›
Phycodnaviridae›
Prasinovirus›
Ostreococcus_lucimarinus_virus_OlV5
TaxID: 754064
Cluster
View cluster (115 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-185_227-249
Domain cluster:
rep: NC_043427__YP_009666084.1__FK997-gp39__00039__D5-203_243-266_355-370
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04321.24 best | RmlD_sub_bind | 37.3 | 2.40e-09 | 99.5% | 58.2% |
| PF16363.12 | GDP_Man_Dehyd | 232.2 | 1.60e-68 | 88.3% | 55.4% |
| PF01370.28 | Epimerase | 157.2 | 6.90e-46 | 88.3% | 71.2% |
| PF02719.22 | Polysacc_synt_2 | 21.1 | 2.10e-04 | 57.1% | 39.6% |
D2
high
residues 195-224_253-302_324-333
Domain cluster:
rep: GDP-D-mannose_dehydratase__YP_009325563__Only_Syngen_Nebraska_virus_5__1917232__D190-218_249-308_329-344
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16363.12 best | GDP_Man_Dehyd | 39.7 | 5.80e-10 | 71.1% | 18.7% |