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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00034
Bact-VirGOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00034
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 40-118
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e7zA01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.62 | 31.0 | 3.54e-01 | 87.3% | 64.9% |
| 2py5A05 | 4.10.80.20 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 5 | 0.57 | 24.0 | 3.21e-01 | 74.7% | 86.7% |
| 3f02B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.55 | 39.0 | 3.61e-01 | 74.7% | 61.0% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 30.0 | 3.13e-01 | 98.7% | 56.3% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 29.0 | 3.44e-01 | 100.0% | 81.6% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.53 | 35.0 | 3.35e-01 | 79.7% | 56.8% |
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 37.0 | 2.94e-01 | 73.4% | 44.3% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 40.0 | 3.66e-01 | 83.5% | 70.4% |
| 1n93X01 | 1.10.3040.10 | Mainly Alpha › Orthogonal Bundle › borna disease virus nucleoprotein, domain 1 › borna disease virus nucleoprotein, domain 1 | 0.52 | 40.0 | 3.03e-01 | 84.8% | 71.2% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 29.0 | 3.14e-01 | 98.7% | 62.7% |
| 1hztA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 40.0 | 3.37e-01 | 89.9% | 95.4% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 25.0 | 2.72e-01 | 94.9% | 53.0% |
| 5ay6A01 | 2.60.98.20 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Flagellar hook protein FlgE | 0.51 | 43.0 | 3.43e-01 | 97.5% | 99.4% |
| 3ol0B00 | 6.20.90.30 | Special › Other non-globular › SH3 type barrels. › | 0.50 | 25.0 | 3.15e-01 | 100.0% | 82.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3508175 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.59 | 34.0 | 3.99e-01 | 93.7% | 88.0% |
| 3945142 | 252.2.1.7 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › PF30395 | 0.58 | 27.0 | 3.16e-01 | 87.3% | 60.0% |
| 3786120 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.57 | 33.0 | 3.93e-01 | 74.7% | 90.0% |
| 3933293 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.57 | 33.0 | 3.75e-01 | 91.1% | 77.6% |
| 4606688 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.57 | 30.0 | 3.08e-01 | 98.7% | 52.0% |
| 3585186 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.57 | 23.0 | 3.15e-01 | 75.9% | 74.3% |
| 5041236 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.56 | 26.0 | 3.06e-01 | 91.1% | 58.2% |
| 3924597 | 330.16.1.0 ↗ | a+b two layers › dsRBD-like › ODA16 N-terminal domain › ODA16 N-terminal domain | 0.56 | 41.0 | 4.27e-01 | 78.5% | 91.4% |
| 5039702 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 27.0 | 3.40e-01 | 98.7% | 77.8% |
| 4999190 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 41.0 | 3.55e-01 | 79.7% | 100.0% |
| 3242234 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 41.0 | 2.59e-01 | 87.3% | 34.8% |
| 3789900 | 220.1.1.5 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PID | 0.53 | 41.0 | 3.49e-01 | 84.8% | 74.1% |
| 3529495 | 2004.5.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN,dDENN | 0.53 | 45.0 | 3.14e-01 | 96.2% | 77.5% |
| 3960168 | 802.1.1.1 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom | 0.53 | 32.0 | 3.76e-01 | 94.9% | 94.0% |
| 4011414 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.53 | 41.0 | 3.13e-01 | 88.6% | 77.2% |
| 3508249 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.52 | 40.0 | 2.98e-01 | 83.5% | 54.6% |
| 4189267 | 3604.1.1.0 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain | 0.52 | 27.0 | 3.05e-01 | 82.3% | 65.0% |
| 3591459 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.51 | 39.0 | 3.87e-01 | 83.5% | 95.3% |
| 3643159 | 6042.1.1.0 ↗ | beta duplicates or obligate multimers › N-terminal domain of HCV E1 › N-terminal domain of HCV E1 › N-terminal domain of HCV E1 | 0.51 | 31.0 | 2.93e-01 | 83.5% | 45.6% |
| 4093535 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 39.0 | 3.38e-01 | 84.8% | 64.6% |