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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00037
Bact-VirGOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00037
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-103
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.75 | 56.0 | 5.68e-01 | 87.5% | 81.8% |
| 3o58V00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.66 | 45.0 | 4.52e-01 | 76.8% | 69.5% |
| 2fwrA01 | 3.40.1170.30 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › | 0.63 | 43.0 | 4.37e-01 | 73.2% | 86.0% |
| 1vq8U00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.62 | 42.0 | 4.33e-01 | 76.8% | 77.4% |
| 1jndA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.61 | 42.0 | 3.54e-01 | 71.4% | 98.9% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.61 | 42.0 | 4.12e-01 | 76.8% | 66.1% |
| 4gi3C00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.61 | 40.0 | 4.02e-01 | 78.6% | 66.7% |
| 1wmhA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 40.0 | 3.59e-01 | 71.4% | 48.2% |
| 2cjsC01 | 3.30.60.120 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.58 | 37.0 | 4.11e-01 | 73.2% | 94.7% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 3.11e-01 | 71.4% | 58.1% |
| 4bl7A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 35.0 | 2.98e-01 | 100.0% | 33.0% |
| 2aw4Z00 | 4.10.830.30 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 | 0.57 | 42.0 | 3.96e-01 | 82.1% | 88.6% |
| 4zdtC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 47.0 | 4.49e-01 | 100.0% | 94.3% |
| 2vfrA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.56 | 36.0 | 2.81e-01 | 71.4% | 28.5% |
| 1pqsA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 38.0 | 3.49e-01 | 71.4% | 51.9% |
| 3m4iA02 | 3.30.1490.440 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.55 | 41.0 | 3.88e-01 | 100.0% | 66.2% |
| 4rayA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.55 | 35.0 | 3.73e-01 | 96.4% | 74.0% |
| 4hcsA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 44.0 | 4.25e-01 | 98.2% | 91.0% |
| 1p6vA00 | 2.40.280.10 | Mainly Beta › Beta Barrel › Small Protein B; Chain: A; › Small protein B | 0.53 | 37.0 | 2.92e-01 | 75.0% | 63.2% |
| 1wx9A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 39.0 | 3.48e-01 | 82.1% | 86.0% |
| 1jeyB02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.52 | 43.0 | 3.04e-01 | 94.6% | 84.6% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 40.0 | 4.12e-01 | 83.9% | 92.6% |
| 4uyiA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.51 | 38.0 | 3.04e-01 | 83.9% | 37.0% |
| 5eupA00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.51 | 37.0 | 3.07e-01 | 82.1% | 42.5% |
| 4n0rA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 44.0 | 2.76e-01 | 96.4% | 24.8% |
| 2uzgA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 40.0 | 3.55e-01 | 100.0% | 56.8% |
| 5feyA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.50 | 42.0 | 3.84e-01 | 100.0% | 71.8% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3285436 | 3380.1.1.0 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 | 0.81 | 57.0 | 5.61e-01 | 85.7% | 68.3% |
| 3372361 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.77 | 48.0 | 5.58e-01 | 71.4% | 90.0% |
| 2035461 | 3380.1.1.1 ↗ | a+b duplicates or obligate multimers › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Dimerization domain of Lsr2 › Lsr2 | 0.74 | 55.0 | 5.58e-01 | 87.5% | 80.4% |
| 4964347 | 904.1.1.55 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › PF26046 | 0.73 | 52.0 | 5.67e-01 | 100.0% | 95.6% |
| 4994 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.68 | 48.0 | 4.31e-01 | 75.0% | 62.8% |
| 3567761 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.67 | 45.0 | 4.94e-01 | 82.1% | 97.5% |
| 3898766 | 376.1.3.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE | 0.64 | 41.0 | 4.19e-01 | 76.8% | 67.3% |
| 3361724 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.63 | 43.0 | 3.76e-01 | 76.8% | 45.6% |
| 4025931 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.63 | 43.0 | 3.35e-01 | 76.8% | 31.5% |
| 4504547 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.63 | 43.0 | 3.03e-01 | 76.8% | 21.6% |
| 3552232 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.63 | 43.0 | 3.24e-01 | 76.8% | 28.7% |
| 1832152 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.62 | 43.0 | 4.19e-01 | 76.8% | 66.1% |
| 3545298 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.62 | 39.0 | 3.93e-01 | 78.6% | 61.0% |
| 3224881 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.62 | 42.0 | 3.26e-01 | 76.8% | 30.4% |
| 5036295 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.61 | 43.0 | 4.38e-01 | 76.8% | 76.4% |
| 3385376 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.61 | 54.0 | 4.17e-01 | 100.0% | 69.6% |
| 3731209 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.61 | 42.0 | 3.53e-01 | 76.8% | 41.0% |
| 3504555 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.61 | 40.0 | 3.67e-01 | 78.6% | 48.8% |
| 2878975 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.60 | 41.0 | 3.82e-01 | 76.8% | 53.9% |
| 3416454 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.60 | 40.0 | 4.14e-01 | 75.0% | 76.0% |
| 5073214 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 42.0 | 3.93e-01 | 76.8% | 58.6% |
| 4023822 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.60 | 41.0 | 3.10e-01 | 76.8% | 27.3% |
| 3499880 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.60 | 41.0 | 3.25e-01 | 76.8% | 32.8% |
| 3680502 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.60 | 41.0 | 3.13e-01 | 76.8% | 29.3% |
| 4942722 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.59 | 41.0 | 3.77e-01 | 80.4% | 52.5% |
| 5034061 | 148.1.3.400 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Ribonuc_red_lgN | 0.59 | 46.0 | 3.21e-01 | 85.7% | 49.5% |
| 3813062 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.59 | 41.0 | 3.30e-01 | 75.0% | 80.8% |
| 3579430 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.59 | 41.0 | 2.91e-01 | 73.2% | 40.0% |
| 3211001 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.59 | 50.0 | 4.36e-01 | 100.0% | 77.8% |
| 3500672 | 226.1.1.4 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB_2 | 0.58 | 40.0 | 3.15e-01 | 73.2% | 50.8% |
| 3400250 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.57 | 37.0 | 3.92e-01 | 73.2% | 74.0% |
| 3270580 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.56 | 38.0 | 3.10e-01 | 71.4% | 81.7% |
| 4043692 | 310.1.1.2 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain › Arg_tRNA_synt_N | 0.56 | 35.0 | 2.69e-01 | 75.0% | 29.2% |
| 3221138 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 39.0 | 3.44e-01 | 73.2% | 91.8% |
| 3579929 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.56 | 42.0 | 2.82e-01 | 80.4% | 94.0% |
| 3485806 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.55 | 46.0 | 4.15e-01 | 100.0% | 89.4% |
| 3995555 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.55 | 41.0 | 3.57e-01 | 82.1% | 68.9% |
| 2721320 | 386.1.1.7 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-U11-48K | 0.55 | 34.0 | 3.67e-01 | 89.3% | 77.8% |
| 3750559 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.54 | 43.0 | 3.04e-01 | 89.3% | 57.8% |
| 3410722 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.53 | 44.0 | 4.35e-01 | 100.0% | 100.0% |
| 3390540 | 226.1.1.0 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain | 0.53 | 39.0 | 3.07e-01 | 85.7% | 71.4% |
| 3599123 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 41.0 | 2.59e-01 | 87.5% | 44.9% |
| 4955387 | 3696.1.1.2 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › XPB_DRD | 0.52 | 36.0 | 3.76e-01 | 73.2% | 90.0% |
| 3608162 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 38.0 | 2.83e-01 | 80.4% | 98.8% |
| 2725557 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 44.0 | 3.04e-01 | 98.2% | 50.2% |
| 3175339 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.51 | 42.0 | 3.28e-01 | 94.6% | 44.6% |
| 4028215 | 109.4.1.2417 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Importin_rep_6, TPR_IPO5 | 0.51 | 44.0 | 2.52e-01 | 100.0% | 15.2% |
| 3222769 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.51 | 34.0 | 2.23e-01 | 73.2% | 52.1% |
| 3520629 | 7523.1.1.20 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lig_chan-Glu_bd | 0.51 | 37.0 | 2.79e-01 | 78.6% | 77.1% |
| 4942265 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 37.0 | 3.25e-01 | 76.8% | 96.5% |
| 4940846 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.51 | 37.0 | 3.69e-01 | 94.6% | 79.7% |