←Back to structures

GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00060

Bact-Vir

GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00060

Identity

Kingdom:
phage

Quality

77.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-133
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.63 36.0 4.18e-01 81.5% 79.1%
1nhpA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.57 35.0 3.78e-01 82.3% 70.8%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.54 34.0 3.57e-01 82.3% 69.9%
5azsA02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.54 32.0 3.80e-01 70.8% 89.2%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.54 26.0 3.34e-01 80.8% 84.6%
4fx9A03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.53 33.0 3.47e-01 82.3% 69.0%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.53 45.0 3.28e-01 91.5% 69.2%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 33.0 2.69e-01 82.3% 31.5%
8fkmA01 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 40.0 3.70e-01 81.5% 96.3%
2z13A00 2.30.29.170 Mainly Beta › Roll › PH-domain like › 0.51 34.0 3.58e-01 77.7% 74.4%
2w4yA00 2.40.160.220 Mainly Beta › Beta Barrel › Porin › 0.51 36.0 3.70e-01 75.4% 76.2%
4bs9A05 3.30.160.660 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 38.0 4.01e-01 89.2% 88.6%
1w7cA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 34.0 3.55e-01 73.8% 76.1%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3228161 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.59 41.0 4.40e-01 71.5% 84.3%
4021913 109.3.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.58 38.0 2.49e-01 100.0% 14.6%
3218632 77.1.1.0 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.55 33.0 3.83e-01 87.7% 81.9%
3596842 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 36.0 3.76e-01 77.7% 71.7%
3609858 220.1.1.14 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.54 35.0 3.87e-01 77.7% 81.9%
3214167 2007.2.4.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphoinositide phosphatase › PF27561 0.53 48.0 3.35e-01 100.0% 85.0%
3591170 220.1.1.14 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.52 36.0 3.76e-01 77.7% 76.7%
3388343 5085.1.1.1 ↗ a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.51 37.0 2.53e-01 73.8% 58.6%
4008277 5084.5.1.62 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27458 0.51 44.0 3.29e-01 93.8% 96.9%
3349375 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.51 34.0 3.40e-01 76.2% 65.2%
3803688 2484.1.1.67 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.50 40.0 3.77e-01 83.8% 98.7%