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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00125
Bact-VirGOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00125
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-140
Domain cluster:
rep: AB605730.1__BAK52830.1__X__00018__D24-110
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.72 | 56.0 | 5.34e-01 | 94.2% | 70.0% |
| 7z0sE01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.68 | 54.0 | 5.17e-01 | 94.2% | 73.1% |
| 7arcC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.67 | 57.0 | 5.15e-01 | 94.2% | 68.9% |
| 1cjxB02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.67 | 42.0 | 3.40e-01 | 70.9% | 32.7% |
| 3mcrA00 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.66 | 58.0 | 5.04e-01 | 94.2% | 86.4% |
| 7z7vC01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.64 | 55.0 | 5.11e-01 | 94.2% | 74.8% |
| 2e2dC02 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 37.0 | 3.92e-01 | 83.5% | 71.3% |
| 1wvhA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 49.0 | 4.57e-01 | 95.1% | 84.8% |
| 2b39A03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 40.0 | 3.80e-01 | 71.8% | 98.4% |
| 2c4mA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.58 | 43.0 | 2.81e-01 | 78.6% | 39.6% |
| 2gaiA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.56 | 45.0 | 4.26e-01 | 86.4% | 83.7% |
| 2xswB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.55 | 41.0 | 2.93e-01 | 78.6% | 81.6% |
| 4cgyA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.54 | 43.0 | 4.05e-01 | 86.4% | 85.2% |
| 4l22A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 39.0 | 2.65e-01 | 78.6% | 36.7% |
| 3mg1B02 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 42.0 | 3.99e-01 | 88.3% | 92.0% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 39.0 | 3.65e-01 | 81.6% | 78.8% |
| 1kyfA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.52 | 38.0 | 3.73e-01 | 80.6% | 70.8% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.51 | 38.0 | 2.55e-01 | 80.6% | 91.3% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.50e-01 | 81.6% | 73.8% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977528 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.72 | 55.0 | 5.01e-01 | 89.3% | 61.5% |
| 4407396 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.72 | 58.0 | 4.72e-01 | 86.4% | 63.8% |
| 5044076 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.71 | 52.0 | 4.95e-01 | 90.3% | 66.1% |
| 2774534 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.69 | 59.0 | 4.53e-01 | 90.3% | 52.7% |
| 3617004 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 53.0 | 5.17e-01 | 81.6% | 84.3% |
| 3178803 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.68 | 50.0 | 5.49e-01 | 77.7% | 98.8% |
| 4995179 | 236.3.1.1 ↗ | beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 | 0.68 | 38.0 | 4.14e-01 | 82.5% | 65.9% |
| 4311607 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.66 | 55.0 | 4.93e-01 | 89.3% | 65.0% |
| 3176281 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.63 | 43.0 | 4.92e-01 | 70.9% | 100.0% |
| 3688677 | 4121.1.1.7 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF26616 | 0.62 | 54.0 | 3.67e-01 | 97.1% | 69.1% |
| 3903935 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.61 | 42.0 | 3.05e-01 | 71.8% | 78.8% |
| 4029235 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.60 | 47.0 | 3.80e-01 | 82.5% | 88.4% |
| 4262943 | 220.1.1.184 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP | 0.59 | 54.0 | 5.04e-01 | 99.0% | 86.4% |
| 3923903 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 4.10e-01 | 70.9% | 87.6% |
| 1717299 | 7512.1.1.2 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Phosphorylase | 0.59 | 44.0 | 2.90e-01 | 78.6% | 41.3% |
| 4021392 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.58 | 50.0 | 3.60e-01 | 97.1% | 75.0% |
| 3860088 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.57 | 40.0 | 3.56e-01 | 79.6% | 50.3% |
| 3173646 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.57 | 47.0 | 3.96e-01 | 87.4% | 84.2% |
| 3878539 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 49.0 | 4.34e-01 | 94.2% | 81.8% |
| 4204001 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.55 | 44.0 | 3.90e-01 | 84.5% | 87.3% |
| 5053256 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.55 | 41.0 | 3.87e-01 | 79.6% | 64.8% |
| 3692621 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.54 | 44.0 | 4.08e-01 | 86.4% | 87.7% |
| 3741555 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.54 | 47.0 | 3.62e-01 | 96.1% | 85.7% |
| 5052861 | 211.1.1.7 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_4 | 0.53 | 37.0 | 3.37e-01 | 73.8% | 96.4% |
| 1109540 | 2.3.1.1 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › TIMP | 0.53 | 37.0 | 3.13e-01 | 73.8% | 45.1% |
| 5049844 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.52 | 40.0 | 3.09e-01 | 82.5% | 80.0% |
| 4015408 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 45.0 | 3.13e-01 | 97.1% | 56.8% |
| 4106730 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.52 | 46.0 | 4.15e-01 | 95.1% | 76.3% |
| 4103289 | 3435.1.1.3 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › CENP-L | 0.51 | 42.0 | 3.10e-01 | 88.3% | 53.3% |
| 4956268 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.51 | 38.0 | 2.94e-01 | 79.6% | 37.5% |
| 3651844 | 5.1.3.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 | 0.50 | 33.0 | 2.36e-01 | 77.7% | 19.2% |
| 4983267 | 2004.1.1.94 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP_bind_1 | 0.50 | 35.0 | 3.03e-01 | 80.6% | 42.9% |
| 3828738 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.50 | 39.0 | 3.49e-01 | 85.4% | 81.9% |