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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00150

Bact-Vir

GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00150

Identity

Kingdom:
phage

Quality

85.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-39
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8egxA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.61 45.0 3.56e-01 94.9% 35.6%
2wdoA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.59 46.0 3.43e-01 97.4% 41.5%
1n67A01 2.60.40.1280 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 43.0 3.17e-01 100.0% 27.0%
1b35B00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.55 41.0 2.65e-01 100.0% 37.3%
2r6fA06 1.20.1580.10 Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain 0.54 39.0 2.98e-01 97.4% 71.7%
3rayA00 2.170.270.10 Mainly Beta › Beta Complex › Beta-clip-like › SET domain 0.53 42.0 2.92e-01 94.9% 79.2%
3icyA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 37.0 2.77e-01 76.9% 92.4%
1b69A00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.53 37.0 3.28e-01 79.5% 49.3%
2uvaG11 6.10.60.10 Special › Helix non-globular › Hydrophobic Seed Protein › 0.53 37.0 3.46e-01 79.5% 56.4%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 2.70e-01 82.1% 53.4%
5xukA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.53 39.0 3.07e-01 97.4% 42.6%
6teyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.17e-01 76.9% 100.0%
2kxqA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.52 35.0 3.70e-01 89.7% 93.3%
6ks6Z01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.52 39.0 2.53e-01 100.0% 63.9%
3p9dG01 1.10.560.10 Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain 0.52 39.0 2.56e-01 100.0% 62.1%
2dk1A00 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.52 35.0 3.38e-01 97.4% 58.0%
3fbyA01 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.51 35.0 3.41e-01 87.2% 59.6%
1z9hA02 6.20.200.30 Special › Other non-globular › Defensin A-like › 0.50 35.0 3.46e-01 71.8% 74.4%
2k2sB00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.50 34.0 3.26e-01 97.4% 56.4%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4977332 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.62 47.0 4.06e-01 94.9% 51.4%
3926825 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 49.0 3.72e-01 100.0% 59.1%
3359942 7581.1.1.16 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › FAE1_CUT1_RppA 0.60 45.0 3.24e-01 87.2% 36.3%
3937499 101.1.2.4 ↗ alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.59 41.0 2.81e-01 71.8% 50.7%
3582491 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.58 44.0 3.19e-01 100.0% 45.3%
3217609 64.1.1.1 ↗ beta meanders › WW domain-like › WW domain › WW domain › WW 0.58 39.0 3.85e-01 89.7% 65.1%
3401714 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.56 42.0 3.28e-01 100.0% 60.0%
3961719 323.1.1.5 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.56 42.0 3.02e-01 100.0% 62.6%
3593349 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 46.0 2.75e-01 94.9% 25.7%
3411401 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.55 40.0 3.22e-01 87.2% 57.9%
3480732 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.55 41.0 3.27e-01 100.0% 41.8%
3842153 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 40.0 3.05e-01 89.7% 51.7%
3257066 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.54 39.0 2.54e-01 87.2% 35.4%
4140359 190.1.1.7 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › MATalpha_HMGbox 0.54 37.0 2.64e-01 74.4% 23.3%
3622878 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 37.0 3.21e-01 76.9% 38.6%
3619305 7579.1.1.6 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.54 39.0 2.52e-01 100.0% 29.7%
3268125 387.1.1.0 ↗ few secondary structure elements › omega toxin-like › omega toxin-related › omega toxin-related 0.52 35.0 3.54e-01 84.6% 82.2%
3927639 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 40.0 2.37e-01 94.9% 19.2%
3674411 386.1.1.4 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED 0.51 37.0 3.44e-01 82.1% 90.9%