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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00156
Bact-VirGOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00156
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-89
Domain cluster:
rep: NC_048028.1__YP_009807707.1__HOT82_gp011__00011__D2-98
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dq3A02 | 3.30.160.90 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 37.0 | 3.89e-01 | 98.9% | 67.1% |
| 5jowA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 45.0 | 3.44e-01 | 77.0% | 65.5% |
| 2dy1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 41.0 | 2.92e-01 | 75.9% | 24.7% |
| 2gtiA01 | 3.30.160.820 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like | 0.56 | 38.0 | 4.25e-01 | 83.9% | 93.8% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.56 | 39.0 | 3.72e-01 | 82.8% | 63.6% |
| 4qa8A00 | 2.50.20.20 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.55 | 44.0 | 3.40e-01 | 89.7% | 55.7% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 39.0 | 2.66e-01 | 74.7% | 51.7% |
| 4ci8A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 42.0 | 2.82e-01 | 83.9% | 35.2% |
| 4ah6A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 35.0 | 3.26e-01 | 100.0% | 51.8% |
| 3igfA02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 4.28e-01 | 90.8% | 97.3% |
| 5zx8A00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.51 | 38.0 | 3.09e-01 | 82.8% | 97.3% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.51 | 36.0 | 3.62e-01 | 98.9% | 75.6% |
| 3uuwB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.50 | 39.0 | 3.07e-01 | 83.9% | 80.4% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 41.0 | 2.80e-01 | 90.8% | 93.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4226766 | 3894.1.1.3 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › GtfB_M | 0.66 | 39.0 | 3.44e-01 | 94.3% | 38.5% |
| 4992470 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.66 | 34.0 | 4.02e-01 | 94.3% | 71.7% |
| 5025855 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.61 | 39.0 | 4.23e-01 | 80.5% | 80.0% |
| 4260682 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.61 | 46.0 | 3.66e-01 | 81.6% | 62.2% |
| 5062211 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.60 | 43.0 | 3.35e-01 | 77.0% | 62.0% |
| 3595430 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.56 | 44.0 | 3.40e-01 | 85.1% | 66.0% |
| 4232128 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.55 | 44.0 | 4.64e-01 | 87.4% | 96.2% |
| 4301684 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.53 | 37.0 | 3.00e-01 | 74.7% | 76.5% |
| 3554865 | 316.1.1.25 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap_D4 | 0.52 | 36.0 | 2.75e-01 | 72.4% | 61.9% |
| 3949940 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.52 | 42.0 | 4.24e-01 | 87.4% | 97.6% |
| 4569627 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.52 | 42.0 | 2.98e-01 | 92.0% | 88.9% |
| 3028388 | 319.1.1.4 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 | 0.52 | 40.0 | 4.32e-01 | 83.9% | 100.0% |
| None | — | 0.51 | 38.0 | 3.02e-01 | 82.8% | 35.5% |