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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00169
Bact-VirGOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00169
Identity
- Kingdom:
- phage
Quality
88.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-48_85-103_158-169
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4fflA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.66 | 50.0 | 3.45e-01 | 81.0% | 66.4% |
| 2db8A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 37.0 | 3.25e-01 | 72.2% | 42.7% |
| 2ec1A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 42.0 | 3.71e-01 | 70.9% | 77.1% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.61 | 48.0 | 3.40e-01 | 84.8% | 89.7% |
| 1ztuA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 47.0 | 3.76e-01 | 82.3% | 62.3% |
| 3mfdA01 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 43.0 | 3.08e-01 | 75.9% | 92.8% |
| 1wfuA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 38.0 | 3.62e-01 | 75.9% | 54.7% |
| 3gtyX02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.60 | 43.0 | 4.23e-01 | 75.9% | 82.1% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.60 | 42.0 | 3.51e-01 | 73.4% | 83.3% |
| 7pjcA02 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.59 | 41.0 | 3.41e-01 | 70.9% | 73.6% |
| 2qcsB02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 37.0 | 3.15e-01 | 75.9% | 40.0% |
| 2j3tC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 40.0 | 3.37e-01 | 70.9% | 100.0% |
| 5cxwA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.59 | 50.0 | 3.30e-01 | 97.5% | 76.6% |
| 1x5xA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 37.0 | 3.28e-01 | 73.4% | 45.9% |
| 3holA04 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 40.0 | 3.35e-01 | 72.2% | 90.3% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 40.0 | 3.29e-01 | 72.2% | 61.7% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.58 | 47.0 | 4.15e-01 | 89.9% | 78.8% |
| 2e5aA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 49.0 | 3.49e-01 | 93.7% | 77.5% |
| 3lsoA01 | 2.60.40.2270 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 40.0 | 3.25e-01 | 75.9% | 92.9% |
| 2hf6A00 | 3.30.450.60 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.56 | 40.0 | 3.28e-01 | 74.7% | 83.9% |
| 5t8uB01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 48.0 | 3.35e-01 | 93.7% | 77.0% |
| 7ct3A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.56 | 45.0 | 4.00e-01 | 88.6% | 82.9% |
| 3shrA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 35.0 | 2.93e-01 | 75.9% | 37.2% |
| 2fgeA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.55 | 47.0 | 3.39e-01 | 96.2% | 40.6% |
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 47.0 | 4.18e-01 | 93.7% | 74.1% |
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 38.0 | 3.07e-01 | 72.2% | 73.4% |
| 2ewvA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 41.0 | 3.75e-01 | 79.7% | 89.2% |
| 2w42B02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.54 | 41.0 | 2.97e-01 | 82.3% | 64.9% |
| 1ypzF01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 3.98e-01 | 94.9% | 73.2% |
| 3og6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.32e-01 | 73.4% | 54.5% |
| 2cztA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 37.0 | 3.03e-01 | 72.2% | 71.0% |
| 1q8mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.73e-01 | 87.3% | 68.6% |
| 1a5iA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 37.0 | 3.21e-01 | 70.9% | 88.1% |
| 1m0wA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 38.0 | 3.40e-01 | 74.7% | 54.6% |
| 4bsjA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 47.0 | 4.07e-01 | 100.0% | 78.9% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.52 | 43.0 | 4.06e-01 | 91.1% | 84.7% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 36.0 | 3.00e-01 | 73.4% | 86.5% |
| 2vqeC02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.52 | 42.0 | 3.93e-01 | 91.1% | 78.0% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.52 | 42.0 | 3.60e-01 | 91.1% | 59.4% |
| 3frnA01 | 3.10.129.70 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.52 | 42.0 | 3.51e-01 | 88.6% | 79.1% |
| 6iomB01 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 42.0 | 4.26e-01 | 87.3% | 90.9% |
| 8ezmH02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.18e-01 | 72.2% | 62.5% |
| 5bp3B00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.51 | 44.0 | 3.03e-01 | 97.5% | 77.7% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3466470 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.71 | 48.0 | 4.09e-01 | 70.9% | 67.7% |
| 3612244 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 48.0 | 4.16e-01 | 72.2% | 72.8% |
| 3574392 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 49.0 | 4.27e-01 | 74.7% | 72.5% |
| 3701194 | 220.1.1.67 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › EVH1_PP4R3 | 0.68 | 49.0 | 4.06e-01 | 75.9% | 75.0% |
| 3991921 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 47.0 | 4.24e-01 | 75.9% | 74.6% |
| 3718188 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.66 | 47.0 | 4.13e-01 | 75.9% | 76.7% |
| 3519329 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 47.0 | 3.96e-01 | 77.2% | 85.0% |
| 3791314 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.65 | 44.0 | 3.69e-01 | 70.9% | 62.2% |
| 3576362 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 46.0 | 4.25e-01 | 94.9% | 60.0% |
| 3716580 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.63 | 53.0 | 4.31e-01 | 92.4% | 84.0% |
| 160946 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.62 | 37.0 | 3.25e-01 | 72.2% | 42.7% |
| 4939984 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 50.0 | 4.23e-01 | 84.8% | 69.1% |
| 3240374 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.61 | 45.0 | 2.99e-01 | 77.2% | 97.5% |
| 3703071 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.61 | 41.0 | 4.05e-01 | 75.9% | 64.7% |
| 4941178 | 223.8.1.0 ↗ | a+b three layers › Profilin-like › LapD periplasmic domain › LapD periplasmic domain | 0.60 | 49.0 | 4.46e-01 | 89.9% | 72.2% |
| 3795297 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 44.0 | 3.98e-01 | 79.7% | 84.2% |
| 3517479 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.59 | 35.0 | 3.25e-01 | 73.4% | 47.0% |
| 4526470 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.59 | 52.0 | 3.65e-01 | 100.0% | 71.7% |
| 4000362 | 223.2.1.36 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 | 0.58 | 41.0 | 3.78e-01 | 75.9% | 69.5% |
| 5000843 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 45.0 | 4.04e-01 | 88.6% | 81.7% |
| 3618238 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.56 | 50.0 | 4.55e-01 | 98.7% | 87.5% |
| 3875277 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.55 | 41.0 | 3.58e-01 | 77.2% | 72.2% |
| 5024072 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 42.0 | 3.82e-01 | 81.0% | 69.5% |
| 3600213 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.55 | 43.0 | 2.71e-01 | 86.1% | 50.6% |
| 4034279 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 43.0 | 4.25e-01 | 92.4% | 80.0% |
| 3322115 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.55 | 45.0 | 4.05e-01 | 93.7% | 70.4% |
| 3251967 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.54 | 37.0 | 3.13e-01 | 70.9% | 94.1% |
| 3882689 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.54 | 40.0 | 3.20e-01 | 75.9% | 53.8% |
| 4469841 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.54 | 43.0 | 4.10e-01 | 88.6% | 80.0% |
| 4028203 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.54 | 43.0 | 4.03e-01 | 88.6% | 80.8% |
| 4946510 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.54 | 38.0 | 3.53e-01 | 75.9% | 57.1% |
| 4457716 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.54 | 43.0 | 3.81e-01 | 91.1% | 64.2% |
| 3227002 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.53 | 45.0 | 4.15e-01 | 93.7% | 80.0% |
| 4942812 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.53 | 43.0 | 3.84e-01 | 91.1% | 65.8% |
| 4595711 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.53 | 43.0 | 3.69e-01 | 89.9% | 58.6% |
| 3478309 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.53 | 43.0 | 3.97e-01 | 88.6% | 72.4% |
| 4598977 | 230.2.1.0 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C | 0.53 | 43.0 | 3.91e-01 | 89.9% | 70.0% |
| 3538381 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.20e-01 | 98.7% | 85.6% |
| 4947174 | 230.2.1.0 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C | 0.53 | 43.0 | 3.84e-01 | 91.1% | 66.7% |
| 4153628 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.53 | 43.0 | 3.87e-01 | 89.9% | 70.0% |
| 4832865 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.52 | 42.0 | 3.65e-01 | 89.9% | 63.2% |
| 5000753 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.52 | 42.0 | 3.62e-01 | 91.1% | 82.3% |
| 3249540 | 230.2.1.1 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › Ribosomal_S3_C | 0.52 | 42.0 | 3.80e-01 | 91.1% | 71.8% |
| 3472095 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 39.0 | 3.63e-01 | 91.1% | 63.0% |
| 3840076 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.51 | 34.0 | 3.79e-01 | 72.2% | 91.7% |
| 3508273 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.51 | 41.0 | 4.01e-01 | 93.7% | 78.9% |
| 4031670 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.51 | 32.0 | 3.61e-01 | 74.7% | 85.0% |
| 4120726 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.51 | 36.0 | 3.45e-01 | 73.4% | 91.1% |
| 3980339 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 40.0 | 2.77e-01 | 86.1% | 61.1% |
| 3881457 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 44.0 | 3.81e-01 | 98.7% | 74.4% |
| 3177894 | 10.41.1.1 ↗ | beta sandwiches › jelly-roll › Protein Hikeshi jelly-roll domain › Protein Hikeshi jelly-roll domain › Hikeshi-like_N | 0.50 | 40.0 | 3.42e-01 | 91.1% | 55.0% |
D2
medium
residues 49-84_104-157
Domain cluster:
representative