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GOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00186
Bact-VirGOV_bin_1711_contig-70_0_prodigal-single.1__X__X__00186
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-126
Domain cluster:
rep: IMGVR_UViG_3300002120_000001-3300002120-C687J26616_100000034__D8-120
D2
high
residues 130-223
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.64 | 39.0 | 4.38e-01 | 90.4% | 80.3% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.62 | 44.0 | 3.75e-01 | 74.5% | 62.3% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 32.0 | 2.79e-01 | 100.0% | 33.8% |
| 1whqA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 34.0 | 3.81e-01 | 71.3% | 84.5% |
| 4ncbA01 | 3.30.530.60 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.53 | 36.0 | 3.22e-01 | 71.3% | 91.1% |
| 6gp1A00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.53 | 30.0 | 3.49e-01 | 100.0% | 80.0% |
| 3pquA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 37.0 | 3.06e-01 | 74.5% | 66.7% |
| 1jqpA01 | 2.40.128.80 | Mainly Beta › Beta Barrel › Lipocalin › Cathepsin C, exclusion domain | 0.50 | 29.0 | 2.76e-01 | 100.0% | 47.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3606828 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.63 | 47.0 | 4.24e-01 | 91.5% | 56.9% |
| 3600093 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.61 | 46.0 | 4.13e-01 | 91.5% | 56.3% |
| 3929756 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.57 | 42.0 | 4.28e-01 | 76.6% | 80.0% |
| 3464478 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.56 | 46.0 | 3.98e-01 | 92.6% | 74.2% |
| 3917054 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.55 | 39.0 | 3.60e-01 | 91.5% | 56.0% |
| 3579773 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.54 | 37.0 | 3.43e-01 | 71.3% | 83.3% |
| 4943853 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 41.0 | 3.58e-01 | 95.7% | 53.8% |
| 3681710 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.52 | 37.0 | 3.75e-01 | 75.5% | 73.7% |
| 3932180 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 38.0 | 2.66e-01 | 76.6% | 94.9% |